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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170323267
CESR01319782
144980
Gammaproteobacteria
CCG
Arg
>WENV170321713
CESR01074137
279385
Gammaproteobacteria
TTT
Lys
>WENV170323382
CESR01334419
147779
Gammaproteobacteria
CAT
Met
>WENV170323045
CESR01238801
149035
Gammaproteobacteria
CCG
Arg
>WENV170322862
CESR01168826
283668
Gammaproteobacteria
TTT
Lys
>WENV170322007
CESR01099882
236013
Gammaproteobacteria
TGC
Ala
>WENV170323417
CESR01336687
236013
Gammaproteobacteria
TGC
Ala
>WENV170322686
CESR01162769
160030
Gammaproteobacteria
GGG
Pro
>WENV170321450
CESR01057249
149036
Gammaproteobacteria
CCA
Trp
>WENV170320790
CESR01010802
149036
Gammaproteobacteria
CCA
Trp
>WENV170321374
CESR01048646
149036
Gammaproteobacteria
CCA
Trp
>WENV170321392
CESR01049966
149036
Gammaproteobacteria
CCA
Trp
>WENV170323029
CESR01230723
202944
Gammaproteobacteria
TGG
Pro
>WENV170321335
CESR01045486
199268
Gammaproteobacteria
ACG
Arg
>WENV170321336
CESR01045486
199268
Gammaproteobacteria
ACG
Arg
>WENV170323338
CESR01331449
150587
Gammaproteobacteria
CAT
Met
>WENV170321337
CESR01045516
247974
Gammaproteobacteria
CCA
Trp
>WENV170321219
CESR01039240
59830
Gammaproteobacteria
CAA
Leu
>WENV170320995
CESR01022966
158933
Gammaproteobacteria
CAT
Met
>WENV170321602
CESR01066020
412476
Gammaproteobacteria
TCC
Gly
>WENV170320955
CESR01020863
173040
Gammaproteobacteria
GAC
Val
>WENV170321789
CESR01080897
173040
Gammaproteobacteria
GAC
Val
>WENV170322929
CESR01171858
313860
Gammaproteobacteria
GGC
Ala
>WENV170322640
CESR01159756
241136
Gammaproteobacteria
TTG
Gln
>WENV170320804
CESR01011287
250885
Gammaproteobacteria
TGC
Ala
>WENV170320728
CESR01007847
195303
Gammaproteobacteria
GAT
Ile
>WENV170322769
CESR01166250
128930
Gammaproteobacteria
GTC
Asp
>WENV170322151
CESR01115789
59658
Gammaproteobacteria
CAA
Leu
>WENV170322309
CESR01130785
237421
Gammaproteobacteria
TGT
Thr
>WENV170320991
CESR01022707
149037
Gammaproteobacteria
GAC
Val
>WENV170321267
CESR01041951
411735
Gammaproteobacteria
GCA
Cys
>WENV170323434
CESR01337358
45411
Gammaproteobacteria
GGA
Ser
>WENV170321526
CESR01062031
101786
Gammaproteobacteria
GAG
Leu
>WENV170322709
CESR01164058
288517
Gammaproteobacteria
TGT
Thr
>WENV170322653
CESR01160852
147117
Gammaproteobacteria
GTC
Asp
>WENV170323021
CESR01226631
175964
Gammaproteobacteria
CAT
Met
>WENV170320606
CESR01000447
270352
Gammaproteobacteria
GCC
Gly
>WENV170321793
CESR01081174
173617
Gammaproteobacteria
GTC
Asp
>WENV170321603
CESR01066020
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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