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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170340597
CETC01013294
95985
Gammaproteobacteria
TAG
Leu
>WENV170341310
CETC01152386
145368
Gammaproteobacteria
CCT
Arg
>WENV170341078
CETC01067796
47425
Gammaproteobacteria
GGA
Ser
>WENV170340607
CETC01014379
160030
Gammaproteobacteria
GGG
Pro
>WENV170340958
CETC01056720
160030
Gammaproteobacteria
GGG
Pro
>WENV170340533
CETC01006173
145196
Gammaproteobacteria
CAT
Met
>WENV170340828
CETC01037664
276072
Gammaproteobacteria
>WENV170340877
CETC01044832
144979
Gammaproteobacteria
CGG
Pro
>WENV170341213
CETC01119444
198730
Gammaproteobacteria
GAC
Val
>WENV170341329
CETC01154666
195519
Gammaproteobacteria
CAT
Met
>WENV170340959
CETC01057002
44886
Gammaproteobacteria
TGA
Ser
>WENV170341285
CETC01144624
238511
Gammaproteobacteria
TTT
Lys
>WENV170340894
CETC01048914
159514
Gammaproteobacteria
TGG
Pro
>WENV170341294
CETC01147848
145369
Gammaproteobacteria
CGG
Pro
>WENV170341253
CETC01132541
349095
Gammaproteobacteria
TCC
Gly
>WENV170341241
CETC01129262
149073
Gammaproteobacteria
CAT
Met
>WENV170340911
CETC01051441
164116
Gammaproteobacteria
TCT
Arg
>WENV170340529
CETC01006046
199268
Gammaproteobacteria
ACG
Arg
>WENV170340530
CETC01006046
199268
Gammaproteobacteria
ACG
Arg
>WENV170340531
CETC01006046
199268
Gammaproteobacteria
ACG
Arg
>WENV170340506
CETC01003270
152450
Gammaproteobacteria
GAC
Val
>WENV170340921
CETC01052963
95635
Gammaproteobacteria
CAA
Leu
>WENV170340698
CETC01021570
243902
Gammaproteobacteria
GTT
Asn
>WENV170340763
CETC01030007
243902
Gammaproteobacteria
GTT
Asn
>WENV170340599
CETC01013496
269152
Gammaproteobacteria
GTG
His
>WENV170340840
CETC01039497
59830
Gammaproteobacteria
CAA
Leu
>WENV170340910
CETC01051441
147055
Gammaproteobacteria
TGG
Pro
>WENV170340510
CETC01004075
158933
Gammaproteobacteria
CAT
Met
>WENV170340485
CETC01001787
412476
Gammaproteobacteria
TCC
Gly
>WENV170340484
CETC01001787
113870
Gammaproteobacteria
GTA
Tyr
>WENV170341164
CETC01086107
338337
Gammaproteobacteria
CCT
Arg
>WENV170340596
CETC01013294
147123
Gammaproteobacteria
CAT
Met
>WENV170340672
CETC01020411
151889
Gammaproteobacteria
CAT
Met
>WENV170340676
CETC01020782
151889
Gammaproteobacteria
CAT
Met
>WENV170341042
CETC01065368
146807
Gammaproteobacteria
TCT
Arg
>WENV170340636
CETC01016897
243921
Gammaproteobacteria
TTT
Lys
>WENV170340930
CETC01053147
23669
Gammaproteobacteria
GCT
Ser
>WENV170340477
CETC01001026
411735
Gammaproteobacteria
GCA
Cys
>WENV170340520
CETC01005125
411735
Gammaproteobacteria
GCA
Cys
>WENV170341077
CETC01067705
23396
Gammaproteobacteria
GGA
Ser
>WENV170340967
CETC01058275
20500
Gammaproteobacteria
GGA
Ser
>WENV170340863
CETC01042334
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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