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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170345385
CETF01000677
236480
Gammaproteobacteria
GTG
His
>WENV170345384
CETF01000677
147777
Gammaproteobacteria
TCT
Arg
>WENV170345383
CETF01000677
147055
Gammaproteobacteria
TGG
Pro
>WENV170345386
CETF01000677
147055
Gammaproteobacteria
TGG
Pro
>WENV170345389
CETF01001730
238511
Gammaproteobacteria
TTT
Lys
>WENV170345390
CETF01001730
238511
Gammaproteobacteria
TTT
Lys
>WENV170345399
CETF01003331
6976
Gammaproteobacteria
GCT
Ser
>WENV170345413
CETF01004279
147025
Gammaproteobacteria
CAT
Met
>WENV170345414
CETF01004279
147025
Gammaproteobacteria
CAT
Met
>WENV170345419
CETF01005828
157977
Gammaproteobacteria
TGG
Pro
>WENV170345426
CETF01006505
147160
Gammaproteobacteria
ACG
Arg
>WENV170345425
CETF01006505
153475
Gammaproteobacteria
ACG
Arg
>WENV170345424
CETF01006505
6976
Gammaproteobacteria
GCT
Ser
>WENV170345430
CETF01008101
241230
Gammaproteobacteria
GAA
Phe
>WENV170345505
CETF01021244
235516
Gammaproteobacteria
GTG
His
>WENV170345521
CETF01023350
145196
Gammaproteobacteria
CAT
Met
>WENV170345522
CETF01024484
45411
Gammaproteobacteria
GGA
Ser
>WENV170345544
CETF01028438
413586
Gammaproteobacteria
GCA
Cys
>WENV170345543
CETF01028438
237708
Gammaproteobacteria
GCC
Gly
>WENV170345605
CETF01038934
147777
Gammaproteobacteria
TCT
Arg
>WENV170345604
CETF01038934
147055
Gammaproteobacteria
TGG
Pro
>WENV170345624
CETF01043258
16460
Gammaproteobacteria
TGA
Ser
>WENV170345644
CETF01046346
148148
Gammaproteobacteria
GAC
Val
>WENV170345651
CETF01047166
147025
Gammaproteobacteria
CAT
Met
>WENV170345687
CETF01054723
145713
Gammaproteobacteria
CAT
Met
>WENV170345689
CETF01054913
146807
Gammaproteobacteria
TCT
Arg
>WENV170345739
CETF01062431
339597
Gammaproteobacteria
CCG
Arg
>WENV170345741
CETF01062539
148148
Gammaproteobacteria
GAC
Val
>WENV170345742
CETF01062628
16460
Gammaproteobacteria
TGA
Ser
>WENV170345743
CETF01062852
150183
Gammaproteobacteria
CCG
Arg
>WENV170345813
CETF01084286
240619
Gammaproteobacteria
TGT
Thr
>WENV170345841
CETF01098193
237221
Gammaproteobacteria
GGC
Ala
>WENV170345849
CETF01100172
147778
Gammaproteobacteria
GGG
Pro
>WENV170345886
CETF01108594
149073
Gammaproteobacteria
CAT
Met
>WENV170345891
CETF01109525
96103
Gammaproteobacteria
CAA
Leu
>WENV170345893
CETF01109682
339596
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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