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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170352397
CETH01184339
365250
Alphaproteobacteria
GCC
Gly
>WENV170352585
CETH01261385
113700
Alphaproteobacteria
>WENV170352514
CETH01217858
23561
Alphaproteobacteria
GGA
Ser
>WENV170352871
CETH01386230
190043
Alphaproteobacteria
CAT
Met
>WENV170352101
CETH01179244
200119
Alphaproteobacteria
CAT
Met
>WENV170352011
CETH01176431
252148
Alphaproteobacteria
TGT
Thr
>WENV170350609
CETH01093153
254522
Alphaproteobacteria
GAA
Phe
>WENV170351448
CETH01150168
319925
Alphaproteobacteria
TGT
Thr
>WENV170351496
CETH01152591
319925
Alphaproteobacteria
TGT
Thr
>WENV170351518
CETH01153917
319925
Alphaproteobacteria
TGT
Thr
>WENV170352123
CETH01179748
319925
Alphaproteobacteria
TGT
Thr
>WENV170352126
CETH01179815
319925
Alphaproteobacteria
TGT
Thr
>WENV170351156
CETH01130336
266073
Alphaproteobacteria
TTT
Lys
>WENV170350067
CETH01059803
412424
Alphaproteobacteria
TCC
Gly
>WENV170349573
CETH01029811
150356
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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