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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170360987
CETL01214492
238370
Gammaproteobacteria
TTT
Lys
>WENV170360522
CETL01115137
313881
Gammaproteobacteria
GGC
Ala
>WENV170360622
CETL01127881
244202
Gammaproteobacteria
TTT
Lys
>WENV170360493
CETL01111919
171935
Gammaproteobacteria
ACG
Arg
>WENV170359556
CETL01004377
322642
Gammaproteobacteria
GGT
Thr
>WENV170360142
CETL01069674
322642
Gammaproteobacteria
GGT
Thr
>WENV170361070
CETL01255792
199268
Gammaproteobacteria
ACG
Arg
>WENV170359612
CETL01010358
173040
Gammaproteobacteria
GAC
Val
>WENV170360313
CETL01090269
128930
Gammaproteobacteria
GTC
Asp
>WENV170359833
CETL01031287
237421
Gammaproteobacteria
TGT
Thr
>WENV170360804
CETL01144945
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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