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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170362703
CETM01093477
387387
Cyanobacteria
GAC
Val
>WENV170362882
CETM01108076
387387
Cyanobacteria
GAC
Val
>WENV170362938
CETM01112356
387387
Cyanobacteria
GAC
Val
>WENV170363178
CETM01134380
387387
Cyanobacteria
GAC
Val
>WENV170363238
CETM01140203
387387
Cyanobacteria
GAC
Val
>WENV170364742
CETM01418070
387387
Cyanobacteria
GAC
Val
>WENV170362411
CETM01070155
99881
Cyanobacteria
GAG
Leu
>WENV170363744
CETM01184287
162341
Cyanobacteria
TCT
Arg
>WENV170362990
CETM01117225
267489
Cyanobacteria
GGC
Ala
>WENV170363774
CETM01186155
267489
Cyanobacteria
GGC
Ala
>WENV170364186
CETM01203870
344607
Cyanobacteria
CCC
Gly
>WENV170364840
CETM01444997
344607
Cyanobacteria
CCC
Gly
>WENV170363820
CETM01190207
370624
Cyanobacteria
TTG
Gln
>WENV170362646
CETM01088152
153480
Cyanobacteria
CAT
Met
>WENV170363264
CETM01143642
153480
Cyanobacteria
CAT
Met
>WENV170362747
CETM01097595
153271
Cyanobacteria
TCT
Arg
>WENV170362875
CETM01107457
145893
Cyanobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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