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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170366292
CETO01051485
237493
Alphaproteobacteria
CCA
Trp
>WENV170366879
CETO01145318
306070
Alphaproteobacteria
CCA
Trp
>WENV170366259
CETO01047536
159305
Alphaproteobacteria
GTC
Asp
>WENV170366895
CETO01148603
256175
Alphaproteobacteria
TGT
Thr
>WENV170366443
CETO01067182
421153
Alphaproteobacteria
>WENV170366516
CETO01072421
421153
Alphaproteobacteria
>WENV170366931
CETO01156474
339723
Alphaproteobacteria
>WENV170366241
CETO01044930
147577
Alphaproteobacteria
CCG
Arg
>WENV170366242
CETO01045181
147577
Alphaproteobacteria
CCG
Arg
>WENV170366178
CETO01039597
162801
Alphaproteobacteria
GTG
His
>WENV170366505
CETO01071537
80918
Alphaproteobacteria
GAG
Leu
>WENV170366278
CETO01049010
74116
Alphaproteobacteria
CAG
Leu
>WENV170366112
CETO01034056
74116
Alphaproteobacteria
CAG
Leu
>WENV170366782
CETO01106514
113716
Alphaproteobacteria
CAA
Leu
>WENV170366243
CETO01045222
339725
Alphaproteobacteria
GAA
Phe
>WENV170366431
CETO01066150
23672
Alphaproteobacteria
GCT
Ser
>WENV170366069
CETO01029824
167926
Alphaproteobacteria
CAT
Met
>WENV170366319
CETO01055375
167926
Alphaproteobacteria
CAT
Met
>WENV170365826
CETO01004973
254387
Alphaproteobacteria
TTT
Lys
>WENV170366494
CETO01070359
412281
Alphaproteobacteria
CTG
Gln
>WENV170366012
CETO01023145
369678
Alphaproteobacteria
GGT
Thr
>WENV170366005
CETO01022787
339606
Alphaproteobacteria
>WENV170366851
CETO01136679
339609
Alphaproteobacteria
GGT
Thr
>WENV170366680
CETO01086596
29831
Alphaproteobacteria
TGA
Ser
>WENV170366609
CETO01081144
412424
Alphaproteobacteria
TCC
Gly
>WENV170366857
CETO01139424
113715
Alphaproteobacteria
TAG
Leu
>WENV170366079
CETO01030491
147289
Alphaproteobacteria
GTC
Asp
>WENV170365789
CETO01002167
377327
Alphaproteobacteria
GCC
Gly
>WENV170366503
CETO01071425
377327
Alphaproteobacteria
GCC
Gly
>WENV170366649
CETO01084871
377327
Alphaproteobacteria
GCC
Gly
>WENV170366662
CETO01085574
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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