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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170366612
CETO01081480
338234
Gammaproteobacteria
GAC
Val
>WENV170366837
CETO01130641
258852
Gammaproteobacteria
TTT
Lys
>WENV170367010
CETO01169884
144810
Gammaproteobacteria
TCG
Arg
>WENV170366398
CETO01063943
235341
Gammaproteobacteria
TGT
Thr
>WENV170366054
CETO01028020
113631
Gammaproteobacteria
GTA
Tyr
>WENV170366324
CETO01056219
147779
Gammaproteobacteria
CAT
Met
>WENV170366427
CETO01065755
147779
Gammaproteobacteria
CAT
Met
>WENV170365769
CETO01000459
283840
Gammaproteobacteria
TTC
Glu
>WENV170365876
CETO01010221
149035
Gammaproteobacteria
CCG
Arg
>WENV170366352
CETO01058975
199984
Gammaproteobacteria
CAT
Met
>WENV170366977
CETO01165782
160030
Gammaproteobacteria
GGG
Pro
>WENV170366395
CETO01063875
107766
Gammaproteobacteria
TAG
Leu
>WENV170367051
CETO01174323
23369
Gammaproteobacteria
GCT
Ser
>WENV170366897
CETO01148797
45109
Gammaproteobacteria
GGA
Ser
>WENV170365896
CETO01011922
147114
Gammaproteobacteria
CCT
Arg
>WENV170366730
CETO01088613
145367
Gammaproteobacteria
GGG
Pro
>WENV170366678
CETO01086538
145196
Gammaproteobacteria
CAT
Met
>WENV170366969
CETO01163949
197713
Gammaproteobacteria
CAT
Met
>WENV170366732
CETO01088726
181949
Gammaproteobacteria
CAT
Met
>WENV170366896
CETO01148657
59172
Gammaproteobacteria
CAA
Leu
>WENV170367054
CETO01174357
373590
Gammaproteobacteria
TTG
Gln
>WENV170366670
CETO01086292
149036
Gammaproteobacteria
CCA
Trp
>WENV170366055
CETO01028020
338534
Gammaproteobacteria
TCC
Gly
>WENV170366668
CETO01086193
145261
Gammaproteobacteria
CAT
Met
>WENV170366811
CETO01117443
238511
Gammaproteobacteria
TTT
Lys
>WENV170366681
CETO01086661
44873
Gammaproteobacteria
TGA
Ser
>WENV170366729
CETO01088605
145369
Gammaproteobacteria
CGG
Pro
>WENV170366312
CETO01054470
426403
Gammaproteobacteria
GCA
Cys
>WENV170366315
CETO01054807
95750
Gammaproteobacteria
TAG
Leu
>WENV170365856
CETO01008833
199268
Gammaproteobacteria
ACG
Arg
>WENV170365857
CETO01008833
199268
Gammaproteobacteria
ACG
Arg
>WENV170366710
CETO01088156
309581
Gammaproteobacteria
GAA
Phe
>WENV170366644
CETO01084807
145237
Gammaproteobacteria
CAT
Met
>WENV170367041
CETO01173936
235339
Gammaproteobacteria
GTG
His
>WENV170366070
CETO01029954
269152
Gammaproteobacteria
GTG
His
>WENV170366160
CETO01038709
268812
Gammaproteobacteria
GTT
Asn
>WENV170367042
CETO01173936
106361
Gammaproteobacteria
TAG
Leu
>WENV170366270
CETO01048342
113688
Gammaproteobacteria
GTA
Tyr
>WENV170366640
CETO01084279
236973
Gammaproteobacteria
GTT
Asn
>WENV170366884
CETO01146331
16396
Gammaproteobacteria
TGA
Ser
>WENV170366122
CETO01035018
250885
Gammaproteobacteria
TGC
Ala
>WENV170366235
CETO01044414
146807
Gammaproteobacteria
TCT
Arg
>WENV170365920
CETO01013568
243921
Gammaproteobacteria
TTT
Lys
>WENV170365921
CETO01013568
243921
Gammaproteobacteria
TTT
Lys
>WENV170366036
CETO01025716
59658
Gammaproteobacteria
CAA
Leu
>WENV170365909
CETO01012792
147120
Gammaproteobacteria
CGG
Pro
>WENV170367045
CETO01174014
182592
Gammaproteobacteria
GAC
Val
>WENV170365936
CETO01015292
149037
Gammaproteobacteria
GAC
Val
>WENV170365873
CETO01009780
411735
Gammaproteobacteria
GCA
Cys
>WENV170365990
CETO01021083
147117
Gammaproteobacteria
GTC
Asp
>WENV170366734
CETO01088801
144813
Gammaproteobacteria
CCT
Arg
>WENV170366716
CETO01088272
173617
Gammaproteobacteria
GTC
Asp
>WENV170366571
CETO01077040
239187
Gammaproteobacteria
GGT
Thr
>WENV170365774
CETO01000486
175414
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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