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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170367995
CETQ01002119
149035
Gammaproteobacteria
CCG
Arg
>WENV170368043
CETQ01007336
10767
Gammaproteobacteria
GCT
Ser
>WENV170368044
CETQ01007336
185163
Gammaproteobacteria
ACG
Arg
>WENV170368045
CETQ01007336
185163
Gammaproteobacteria
ACG
Arg
>WENV170368060
CETQ01008253
128930
Gammaproteobacteria
GTC
Asp
>WENV170368163
CETQ01019437
195303
Gammaproteobacteria
GAT
Ile
>WENV170368181
CETQ01021898
184454
Gammaproteobacteria
ACG
Arg
>WENV170368182
CETQ01021898
184454
Gammaproteobacteria
ACG
Arg
>WENV170368184
CETQ01022128
145261
Gammaproteobacteria
CAT
Met
>WENV170368207
CETQ01025111
173040
Gammaproteobacteria
GAC
Val
>WENV170368208
CETQ01025425
147779
Gammaproteobacteria
CAT
Met
>WENV170368285
CETQ01035450
149036
Gammaproteobacteria
CCA
Trp
>WENV170368305
CETQ01038377
59830
Gammaproteobacteria
CAA
Leu
>WENV170368435
CETQ01056391
252289
Gammaproteobacteria
TTT
Lys
>WENV170368452
CETQ01059179
412799
Gammaproteobacteria
GCA
Cys
>WENV170368529
CETQ01069899
146791
Gammaproteobacteria
GAC
Val
>WENV170368533
CETQ01070249
243485
Gammaproteobacteria
TGT
Thr
>WENV170368611
CETQ01080555
249887
Gammaproteobacteria
GGT
Thr
>WENV170368639
CETQ01083562
45345
Gammaproteobacteria
GGA
Ser
>WENV170368757
CETQ01102719
412799
Gammaproteobacteria
GCA
Cys
>WENV170368781
CETQ01108408
173040
Gammaproteobacteria
GAC
Val
>WENV170368907
CETQ01127036
243485
Gammaproteobacteria
TGT
Thr
>WENV170368934
CETQ01129139
149036
Gammaproteobacteria
CCA
Trp
>WENV170368977
CETQ01133882
340801
Gammaproteobacteria
CCT
Arg
>WENV170369042
CETQ01136774
269248
Gammaproteobacteria
CCA
Trp
>WENV170369046
CETQ01136903
238372
Gammaproteobacteria
CCT
Arg
>WENV170369057
CETQ01137125
17329
Gammaproteobacteria
TGA
Ser
>WENV170369150
CETQ01202303
266766
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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