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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170369829
CETR01037600
237493
Alphaproteobacteria
CCA
Trp
>WENV170370678
CETR01130403
237493
Alphaproteobacteria
CCA
Trp
>WENV170369868
CETR01041140
254294
Alphaproteobacteria
>WENV170370676
CETR01129910
254294
Alphaproteobacteria
>WENV170369565
CETR01015748
58865
Alphaproteobacteria
GAG
Leu
>WENV170370375
CETR01095864
58865
Alphaproteobacteria
GAG
Leu
>WENV170370861
CETR01169477
58865
Alphaproteobacteria
GAG
Leu
>WENV170369672
CETR01024498
10665
Alphaproteobacteria
GCT
Ser
>WENV170369654
CETR01022954
162089
Alphaproteobacteria
TGG
Pro
>WENV170370614
CETR01123497
241021
Alphaproteobacteria
GGC
Ala
>WENV170369452
CETR01007764
66752
Alphaproteobacteria
CAG
Leu
>WENV170370859
CETR01168979
113700
Alphaproteobacteria
>WENV170370169
CETR01070041
144964
Alphaproteobacteria
TGG
Pro
>WENV170370679
CETR01130531
159305
Alphaproteobacteria
GTC
Asp
>WENV170370477
CETR01106352
339724
Alphaproteobacteria
TTG
Gln
>WENV170370548
CETR01115854
421153
Alphaproteobacteria
>WENV170370645
CETR01126624
421153
Alphaproteobacteria
>WENV170369657
CETR01023446
338286
Alphaproteobacteria
TTG
Gln
>WENV170370568
CETR01119213
338282
Alphaproteobacteria
GTT
Asn
>WENV170370537
CETR01114924
95928
Alphaproteobacteria
TAG
Leu
>WENV170369851
CETR01039415
162801
Alphaproteobacteria
GTG
His
>WENV170370702
CETR01131918
162801
Alphaproteobacteria
GTG
His
>WENV170370457
CETR01104309
235504
Alphaproteobacteria
TGT
Thr
>WENV170370358
CETR01092275
338289
Alphaproteobacteria
GAC
Val
>WENV170369609
CETR01019276
266911
Alphaproteobacteria
GAA
Phe
>WENV170370372
CETR01095083
266911
Alphaproteobacteria
GAA
Phe
>WENV170370029
CETR01056904
244489
Alphaproteobacteria
CTT
Lys
>WENV170370101
CETR01063764
339750
Alphaproteobacteria
GGT
Thr
>WENV170370451
CETR01103277
167926
Alphaproteobacteria
CAT
Met
>WENV170370105
CETR01064539
161002
Alphaproteobacteria
GTG
His
>WENV170369443
CETR01007238
364533
Alphaproteobacteria
GCC
Gly
>WENV170370493
CETR01108000
364533
Alphaproteobacteria
GCC
Gly
>WENV170369448
CETR01007481
59164
Alphaproteobacteria
GAG
Leu
>WENV170369391
CETR01002971
254653
Alphaproteobacteria
CCA
Trp
>WENV170369574
CETR01017260
359842
Alphaproteobacteria
GAC
Val
>WENV170369918
CETR01046351
65244
Alphaproteobacteria
CAG
Leu
>WENV170369464
CETR01008896
237196
Alphaproteobacteria
CGT
Thr
>WENV170370789
CETR01143064
338288
Alphaproteobacteria
TTC
Glu
>WENV170369395
CETR01003275
160158
Alphaproteobacteria
GAT
Ile
>WENV170369440
CETR01006964
412281
Alphaproteobacteria
CTG
Gln
>WENV170370996
CETR01217872
23717
Alphaproteobacteria
TGA
Ser
>WENV170370711
CETR01132749
266073
Alphaproteobacteria
TTT
Lys
>WENV170370787
CETR01141670
349650
Alphaproteobacteria
CAC
Val
>WENV170371041
CETR01229023
150194
Alphaproteobacteria
TCT
Arg
>WENV170370071
CETR01061517
338287
Alphaproteobacteria
GGT
Thr
>WENV170370845
CETR01164661
339609
Alphaproteobacteria
GGT
Thr
>WENV170370147
CETR01067655
113715
Alphaproteobacteria
TAG
Leu
>WENV170371066
CETR01234335
23743
Alphaproteobacteria
GCT
Ser
>WENV170371183
CETR01258874
114040
Alphaproteobacteria
CAA
Leu
>WENV170369622
CETR01020515
174413
Alphaproteobacteria
CAT
Met
>WENV170370610
CETR01123148
342846
Alphaproteobacteria
GAC
Val
>WENV170370612
CETR01123354
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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