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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170374701
CETT01119200
306609
Bacteroidota
GAA
Phe
>WENV170375021
CETT01151582
306609
Bacteroidota
GAA
Phe
>WENV170375065
CETT01153480
416430
Bacteroidota
GCA
Cys
>WENV170373781
CETT01020351
172532
Bacteroidota
GTC
Asp
>WENV170375487
CETT01302098
154388
Bacteroidota
GTG
His
>WENV170373895
CETT01030798
322068
Bacteroidota
TCC
Gly
>WENV170374383
CETT01081058
322068
Bacteroidota
TCC
Gly
>WENV170374606
CETT01107335
320640
Bacteroidota
TTG
Gln
>WENV170374716
CETT01120635
320640
Bacteroidota
TTG
Gln
>WENV170374977
CETT01148954
320640
Bacteroidota
TTG
Gln
>WENV170374790
CETT01128762
259147
Bacteroidota
TTT
Lys
>WENV170374979
CETT01149025
235802
Bacteroidota
CAT
Met
>WENV170374964
CETT01146612
193627
Bacteroidota
TCT
Arg
>WENV170374384
CETT01081058
342872
Bacteroidota
GGT
Thr
>WENV170373635
CETT01007814
240901
Bacteroidota
TTT
Lys
>WENV170373636
CETT01007814
240901
Bacteroidota
TTT
Lys
>WENV170375028
CETT01151949
148047
Bacteroidota
CAT
Met
>WENV170374907
CETT01141184
193473
Bacteroidota
GTC
Asp
>WENV170374395
CETT01081868
152405
Bacteroidota
GTT
Asn
>WENV170374976
CETT01148491
110457
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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