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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170374823
CETT01133081
312287
Gammaproteobacteria
TGT
Thr
>WENV170374684
CETT01117370
313881
Gammaproteobacteria
GGC
Ala
>WENV170374650
CETT01112914
282537
Gammaproteobacteria
TTC
Glu
>WENV170375088
CETT01164198
199984
Gammaproteobacteria
CAT
Met
>WENV170374540
CETT01098257
283668
Gammaproteobacteria
TTT
Lys
>WENV170374157
CETT01056031
240642
Gammaproteobacteria
GTT
Asn
>WENV170373825
CETT01024165
149036
Gammaproteobacteria
CCA
Trp
>WENV170374711
CETT01120061
152301
Gammaproteobacteria
GAT
Ile
>WENV170375476
CETT01299819
150587
Gammaproteobacteria
CAT
Met
>WENV170373708
CETT01013047
247974
Gammaproteobacteria
CCA
Trp
>WENV170374497
CETT01093703
59830
Gammaproteobacteria
CAA
Leu
>WENV170375464
CETT01297701
319098
Gammaproteobacteria
TAC
Val
>WENV170374571
CETT01103071
410215
Gammaproteobacteria
TTG
Gln
>WENV170374490
CETT01092846
151889
Gammaproteobacteria
CAT
Met
>WENV170373623
CETT01005991
195303
Gammaproteobacteria
GAT
Ile
>WENV170375503
CETT01303274
45411
Gammaproteobacteria
GGA
Ser
>WENV170374320
CETT01073340
147117
Gammaproteobacteria
GTC
Asp
>WENV170374735
CETT01122629
198797
Gammaproteobacteria
TGG
Pro
>WENV170374350
CETT01077708
270352
Gammaproteobacteria
GCC
Gly
>WENV170374957
CETT01145883
173617
Gammaproteobacteria
GTC
Asp
>WENV170373914
CETT01032537
344326
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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