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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170378863
CETV01058890
237493
Alphaproteobacteria
CCA
Trp
>WENV170378409
CETV01019450
254294
Alphaproteobacteria
>WENV170379044
CETV01083624
58865
Alphaproteobacteria
GAG
Leu
>WENV170379613
CETV01149304
66752
Alphaproteobacteria
CAG
Leu
>WENV170379978
CETV01264947
339724
Alphaproteobacteria
TTG
Gln
>WENV170379183
CETV01100992
239035
Alphaproteobacteria
CGC
Ala
>WENV170379309
CETV01115289
249928
Alphaproteobacteria
TAC
Val
>WENV170378290
CETV01009472
357160
Alphaproteobacteria
TTC
Glu
>WENV170378291
CETV01009472
357160
Alphaproteobacteria
TTC
Glu
>WENV170379061
CETV01086064
338289
Alphaproteobacteria
GAC
Val
>WENV170379490
CETV01132788
235496
Alphaproteobacteria
TAC
Val
>WENV170379472
CETV01131415
146929
Alphaproteobacteria
CCG
Arg
>WENV170379799
CETV01222444
339750
Alphaproteobacteria
GGT
Thr
>WENV170379655
CETV01174166
339725
Alphaproteobacteria
GAA
Phe
>WENV170379001
CETV01077506
167926
Alphaproteobacteria
CAT
Met
>WENV170378449
CETV01022424
164825
Alphaproteobacteria
GAT
Ile
>WENV170379140
CETV01094550
243837
Alphaproteobacteria
CGT
Thr
>WENV170379702
CETV01193260
80837
Alphaproteobacteria
TAA
Leu
>WENV170378450
CETV01022424
258529
Alphaproteobacteria
TGC
Ala
>WENV170379439
CETV01128945
150194
Alphaproteobacteria
TCT
Arg
>WENV170379658
CETV01175248
146926
Alphaproteobacteria
GTG
His
>WENV170380036
CETV01270912
150356
Alphaproteobacteria
GTC
Asp
>WENV170379632
CETV01162619
174413
Alphaproteobacteria
CAT
Met
>WENV170378843
CETV01055567
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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