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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170378221
CETV01002823
10767
Gammaproteobacteria
GCT
Ser
>WENV170378241
CETV01005037
250885
Gammaproteobacteria
TGC
Ala
>WENV170378243
CETV01005149
411735
Gammaproteobacteria
GCA
Cys
>WENV170378285
CETV01009058
238511
Gammaproteobacteria
TTT
Lys
>WENV170378315
CETV01012093
411735
Gammaproteobacteria
GCA
Cys
>WENV170378360
CETV01014073
247974
Gammaproteobacteria
CCA
Trp
>WENV170378376
CETV01015018
145368
Gammaproteobacteria
CCT
Arg
>WENV170378386
CETV01016240
16284
Gammaproteobacteria
TGA
Ser
>WENV170378393
CETV01017001
149038
Gammaproteobacteria
TGG
Pro
>WENV170378394
CETV01017001
173648
Gammaproteobacteria
TCT
Arg
>WENV170378428
CETV01020821
243921
Gammaproteobacteria
TTT
Lys
>WENV170378429
CETV01020821
243921
Gammaproteobacteria
TTT
Lys
>WENV170378436
CETV01021304
237412
Gammaproteobacteria
TAC
Val
>WENV170378462
CETV01023533
98737
Gammaproteobacteria
GAG
Leu
>WENV170378477
CETV01024047
243921
Gammaproteobacteria
TTT
Lys
>WENV170378478
CETV01024175
149036
Gammaproteobacteria
CCA
Trp
>WENV170378513
CETV01026740
236030
Gammaproteobacteria
CCA
Trp
>WENV170378554
CETV01028609
59658
Gammaproteobacteria
CAA
Leu
>WENV170378607
CETV01033671
95750
Gammaproteobacteria
TAG
Leu
>WENV170378619
CETV01034796
238499
Gammaproteobacteria
TAC
Val
>WENV170378638
CETV01035984
149037
Gammaproteobacteria
GAC
Val
>WENV170378647
CETV01037001
149035
Gammaproteobacteria
CCG
Arg
>WENV170378658
CETV01037558
412799
Gammaproteobacteria
GCA
Cys
>WENV170378752
CETV01046536
16396
Gammaproteobacteria
TGA
Ser
>WENV170378797
CETV01050441
237221
Gammaproteobacteria
GGC
Ala
>WENV170378827
CETV01053284
145713
Gammaproteobacteria
CAT
Met
>WENV170378855
CETV01058280
235887
Gammaproteobacteria
GTG
His
>WENV170378864
CETV01058936
412476
Gammaproteobacteria
TCC
Gly
>WENV170378865
CETV01058936
239187
Gammaproteobacteria
GGT
Thr
>WENV170378873
CETV01059634
236033
Gammaproteobacteria
TGT
Thr
>WENV170378875
CETV01059634
411767
Gammaproteobacteria
TCC
Gly
>WENV170378876
CETV01059745
235452
Gammaproteobacteria
GAA
Phe
>WENV170378878
CETV01059826
269152
Gammaproteobacteria
GTG
His
>WENV170378891
CETV01061903
175964
Gammaproteobacteria
CAT
Met
>WENV170379023
CETV01080999
145369
Gammaproteobacteria
CGG
Pro
>WENV170379065
CETV01086135
179150
Gammaproteobacteria
CAT
Met
>WENV170379067
CETV01086169
340801
Gammaproteobacteria
CCT
Arg
>WENV170379076
CETV01086395
236031
Gammaproteobacteria
GGC
Ala
>WENV170379084
CETV01087169
98124
Gammaproteobacteria
GAG
Leu
>WENV170379120
CETV01091927
235886
Gammaproteobacteria
TTC
Glu
>WENV170379226
CETV01106239
150297
Gammaproteobacteria
TCT
Arg
>WENV170379227
CETV01106239
235887
Gammaproteobacteria
GTG
His
>WENV170379285
CETV01112747
145196
Gammaproteobacteria
CAT
Met
>WENV170379314
CETV01116063
235837
Gammaproteobacteria
GTT
Asn
>WENV170379324
CETV01117486
173617
Gammaproteobacteria
GTC
Asp
>WENV170379336
CETV01117993
149038
Gammaproteobacteria
TGG
Pro
>WENV170379450
CETV01129757
16460
Gammaproteobacteria
TGA
Ser
>WENV170379497
CETV01133421
145369
Gammaproteobacteria
CGG
Pro
>WENV170379522
CETV01135610
236013
Gammaproteobacteria
TGC
Ala
>WENV170379563
CETV01137157
268606
Gammaproteobacteria
TGT
Thr
>WENV170379571
CETV01137494
411735
Gammaproteobacteria
GCA
Cys
>WENV170379592
CETV01138653
45411
Gammaproteobacteria
GGA
Ser
>WENV170379695
CETV01189089
147696
Gammaproteobacteria
CAT
Met
>WENV170379733
CETV01201207
236025
Gammaproteobacteria
TTG
Gln
>WENV170379737
CETV01203030
163580
Gammaproteobacteria
GAC
Val
>WENV170379780
CETV01216615
149073
Gammaproteobacteria
CAT
Met
>WENV170379803
CETV01223505
241136
Gammaproteobacteria
TTG
Gln
>WENV170379816
CETV01226551
349095
Gammaproteobacteria
TCC
Gly
>WENV170379889
CETV01249055
59460
Gammaproteobacteria
CAA
Leu
>WENV170379943
CETV01259862
16453
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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