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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170380069
CETW01001601
312287
Gammaproteobacteria
TGT
Thr
>WENV170381615
CETW01183760
235887
Gammaproteobacteria
GTG
His
>WENV170380352
CETW01032009
313881
Gammaproteobacteria
GGC
Ala
>WENV170381723
CETW01190983
279385
Gammaproteobacteria
TTT
Lys
>WENV170381425
CETW01162169
149035
Gammaproteobacteria
CCG
Arg
>WENV170381075
CETW01116907
145368
Gammaproteobacteria
CCT
Arg
>WENV170380746
CETW01075050
147053
Gammaproteobacteria
GTT
Asn
>WENV170381106
CETW01120320
171935
Gammaproteobacteria
ACG
Arg
>WENV170381682
CETW01189350
46594
Gammaproteobacteria
GGA
Ser
>WENV170382076
CETW01353991
145367
Gammaproteobacteria
GGG
Pro
>WENV170381562
CETW01178717
145196
Gammaproteobacteria
CAT
Met
>WENV170381050
CETW01114667
163940
Gammaproteobacteria
CCG
Arg
>WENV170381834
CETW01222988
269265
Gammaproteobacteria
GGT
Thr
>WENV170380165
CETW01010935
185163
Gammaproteobacteria
ACG
Arg
>WENV170380166
CETW01010935
185163
Gammaproteobacteria
ACG
Arg
>WENV170380229
CETW01016490
240619
Gammaproteobacteria
TGT
Thr
>WENV170380422
CETW01039643
240642
Gammaproteobacteria
GTT
Asn
>WENV170381261
CETW01142458
149036
Gammaproteobacteria
CCA
Trp
>WENV170381833
CETW01222988
338534
Gammaproteobacteria
TCC
Gly
>WENV170381121
CETW01122379
145369
Gammaproteobacteria
CGG
Pro
>WENV170380935
CETW01100668
174801
Gammaproteobacteria
TGG
Pro
>WENV170381832
CETW01222988
95983
Gammaproteobacteria
>WENV170380587
CETW01059744
202944
Gammaproteobacteria
TGG
Pro
>WENV170380231
CETW01016490
412476
Gammaproteobacteria
TCC
Gly
>WENV170380164
CETW01010935
10767
Gammaproteobacteria
GCT
Ser
>WENV170381280
CETW01144577
173040
Gammaproteobacteria
GAC
Val
>WENV170380102
CETW01005118
341782
Gammaproteobacteria
TTG
Gln
>WENV170381384
CETW01158390
311863
Gammaproteobacteria
GGC
Ala
>WENV170381385
CETW01158390
235886
Gammaproteobacteria
TTC
Glu
>WENV170380366
CETW01033859
195303
Gammaproteobacteria
GAT
Ile
>WENV170381628
CETW01184573
411735
Gammaproteobacteria
GCA
Cys
>WENV170380767
CETW01077671
175964
Gammaproteobacteria
CAT
Met
>WENV170381613
CETW01183760
198797
Gammaproteobacteria
TGG
Pro
>WENV170381499
CETW01170350
20500
Gammaproteobacteria
GGA
Ser
>WENV170380232
CETW01016490
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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