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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170387952
CETZ01029221
183605
Gammaproteobacteria
CCG
Arg
>WENV170388550
CETZ01098189
312287
Gammaproteobacteria
TGT
Thr
>WENV170388768
CETZ01123122
147779
Gammaproteobacteria
CAT
Met
>WENV170388469
CETZ01089353
249887
Gammaproteobacteria
GGT
Thr
>WENV170389105
CETZ01234366
58822
Gammaproteobacteria
CAA
Leu
>WENV170388024
CETZ01037797
160030
Gammaproteobacteria
GGG
Pro
>WENV170388732
CETZ01119470
160030
Gammaproteobacteria
GGG
Pro
>WENV170388451
CETZ01086407
269248
Gammaproteobacteria
CCA
Trp
>WENV170388140
CETZ01050241
240619
Gammaproteobacteria
TGT
Thr
>WENV170387855
CETZ01019004
149036
Gammaproteobacteria
CCA
Trp
>WENV170388330
CETZ01074402
16284
Gammaproteobacteria
TGA
Ser
>WENV170387932
CETZ01026981
17329
Gammaproteobacteria
TGA
Ser
>WENV170389130
CETZ01245319
145369
Gammaproteobacteria
CGG
Pro
>WENV170387851
CETZ01018564
412799
Gammaproteobacteria
GCA
Cys
>WENV170389081
CETZ01226661
340801
Gammaproteobacteria
CCT
Arg
>WENV170387659
CETZ01000550
426403
Gammaproteobacteria
GCA
Cys
>WENV170388392
CETZ01079680
147696
Gammaproteobacteria
CAT
Met
>WENV170388964
CETZ01184118
145237
Gammaproteobacteria
CAT
Met
>WENV170387729
CETZ01006363
59830
Gammaproteobacteria
CAA
Leu
>WENV170388643
CETZ01108591
237412
Gammaproteobacteria
TAC
Val
>WENV170388139
CETZ01050044
236029
Gammaproteobacteria
TGC
Ala
>WENV170388142
CETZ01050241
412476
Gammaproteobacteria
TCC
Gly
>WENV170388833
CETZ01131984
173040
Gammaproteobacteria
GAC
Val
>WENV170388138
CETZ01050044
158081
Gammaproteobacteria
GAT
Ile
>WENV170387852
CETZ01018564
77137
Gammaproteobacteria
TAA
Leu
>WENV170389197
CETZ01261884
241136
Gammaproteobacteria
TTG
Gln
>WENV170387899
CETZ01023514
250885
Gammaproteobacteria
TGC
Ala
>WENV170388304
CETZ01071152
250885
Gammaproteobacteria
TGC
Ala
>WENV170388374
CETZ01077631
151889
Gammaproteobacteria
CAT
Met
>WENV170388725
CETZ01118774
238372
Gammaproteobacteria
CCT
Arg
>WENV170387995
CETZ01034310
128930
Gammaproteobacteria
GTC
Asp
>WENV170387698
CETZ01003536
243485
Gammaproteobacteria
TGT
Thr
>WENV170387785
CETZ01012094
203054
Gammaproteobacteria
ACG
Arg
>WENV170387907
CETZ01024872
411735
Gammaproteobacteria
GCA
Cys
>WENV170388810
CETZ01125402
45411
Gammaproteobacteria
GGA
Ser
>WENV170388054
CETZ01041138
277196
Gammaproteobacteria
GAA
Phe
>WENV170388143
CETZ01050241
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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