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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170389270
CEUA01000868
279385
Gammaproteobacteria
TTT
Lys
>WENV170390121
CEUA01076880
145260
Gammaproteobacteria
CAT
Met
>WENV170391507
CEUA01233525
269248
Gammaproteobacteria
CCA
Trp
>WENV170391046
CEUA01193677
146791
Gammaproteobacteria
GAC
Val
>WENV170390269
CEUA01093277
322642
Gammaproteobacteria
GGT
Thr
>WENV170391140
CEUA01205161
17329
Gammaproteobacteria
TGA
Ser
>WENV170390122
CEUA01076880
97031
Gammaproteobacteria
TAG
Leu
>WENV170390395
CEUA01106311
199268
Gammaproteobacteria
ACG
Arg
>WENV170391143
CEUA01205255
147696
Gammaproteobacteria
CAT
Met
>WENV170390123
CEUA01076880
149038
Gammaproteobacteria
TGG
Pro
>WENV170390809
CEUA01160885
269152
Gammaproteobacteria
GTG
His
>WENV170391518
CEUA01233777
173040
Gammaproteobacteria
GAC
Val
>WENV170390620
CEUA01133372
341782
Gammaproteobacteria
TTG
Gln
>WENV170390564
CEUA01125851
145713
Gammaproteobacteria
CAT
Met
>WENV170391485
CEUA01233061
238372
Gammaproteobacteria
CCT
Arg
>WENV170390519
CEUA01120351
195303
Gammaproteobacteria
GAT
Ile
>WENV170391631
CEUA01270367
45411
Gammaproteobacteria
GGA
Ser
>WENV170391152
CEUA01206023
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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