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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170395890
CEUC01147127
183605
Gammaproteobacteria
CCG
Arg
>WENV170393950
CEUC01000588
235837
Gammaproteobacteria
GTT
Asn
>WENV170395506
CEUC01117210
58767
Gammaproteobacteria
CAG
Leu
>WENV170393983
CEUC01002200
149035
Gammaproteobacteria
CCG
Arg
>WENV170394081
CEUC01007617
185163
Gammaproteobacteria
ACG
Arg
>WENV170395738
CEUC01137268
149036
Gammaproteobacteria
CCA
Trp
>WENV170395985
CEUC01150328
149036
Gammaproteobacteria
CCA
Trp
>WENV170395206
CEUC01090667
426403
Gammaproteobacteria
GCA
Cys
>WENV170394875
CEUC01063428
199268
Gammaproteobacteria
ACG
Arg
>WENV170393964
CEUC01001079
152301
Gammaproteobacteria
GAT
Ile
>WENV170396637
CEUC01325850
150587
Gammaproteobacteria
CAT
Met
>WENV170396670
CEUC01328942
269152
Gammaproteobacteria
GTG
His
>WENV170395297
CEUC01098201
173040
Gammaproteobacteria
GAC
Val
>WENV170395436
CEUC01111727
411842
Gammaproteobacteria
GCA
Cys
>WENV170395784
CEUC01140776
250885
Gammaproteobacteria
TGC
Ala
>WENV170394550
CEUC01038632
319100
Gammaproteobacteria
GGT
Thr
>WENV170394057
CEUC01005494
195303
Gammaproteobacteria
GAT
Ile
>WENV170395135
CEUC01084475
243485
Gammaproteobacteria
TGT
Thr
>WENV170395543
CEUC01121223
149037
Gammaproteobacteria
GAC
Val
>WENV170395762
CEUC01139080
45411
Gammaproteobacteria
GGA
Ser
>WENV170395104
CEUC01082131
101786
Gammaproteobacteria
GAG
Leu
>WENV170395435
CEUC01111727
270352
Gammaproteobacteria
GCC
Gly
>WENV170395487
CEUC01115100
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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