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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170402871
CEUF01005954
238510
Gammaproteobacteria
GCC
Gly
>WENV170402960
CEUF01015545
240642
Gammaproteobacteria
GTT
Asn
>WENV170403190
CEUF01046277
244202
Gammaproteobacteria
TTT
Lys
>WENV170403237
CEUF01052385
247088
Gammaproteobacteria
CCA
Trp
>WENV170403430
CEUF01078491
17426
Gammaproteobacteria
GCT
Ser
>WENV170403439
CEUF01079771
61925
Gammaproteobacteria
TAA
Leu
>WENV170403775
CEUF01123784
238438
Gammaproteobacteria
>WENV170403841
CEUF01126511
260238
Gammaproteobacteria
>WENV170403963
CEUF01143670
149035
Gammaproteobacteria
CCG
Arg
>WENV170403975
CEUF01152709
99112
Gammaproteobacteria
TAG
Leu
>WENV170404030
CEUF01179455
240084
Gammaproteobacteria
GGT
Thr
>WENV170404301
CEUF01278659
165387
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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