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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170407062
CEUH01092311
165001
Bacteroidota
GTT
Asn
>WENV170407459
CEUH01139019
306609
Bacteroidota
GAA
Phe
>WENV170406540
CEUH01035402
308806
Bacteroidota
TCC
Gly
>WENV170406262
CEUH01013347
59355
Bacteroidota
GCT
Ser
>WENV170406252
CEUH01012729
236125
Bacteroidota
GAA
Phe
>WENV170407499
CEUH01141344
127458
Bacteroidota
GAC
Val
>WENV170407778
CEUH01217992
364423
Bacteroidota
GGT
Thr
>WENV170406999
CEUH01082289
273242
Bacteroidota
CCA
Trp
>WENV170406157
CEUH01004180
60695
Bacteroidota
GCT
Ser
>WENV170406768
CEUH01056739
127414
Bacteroidota
TGG
Pro
>WENV170406180
CEUH01006309
127414
Bacteroidota
TGG
Pro
>WENV170406455
CEUH01027931
238764
Bacteroidota
>WENV170407039
CEUH01088835
238764
Bacteroidota
>WENV170407458
CEUH01139001
149691
Bacteroidota
GTT
Asn
>WENV170406332
CEUH01018647
44938
Bacteroidota
TGA
Ser
>WENV170406948
CEUH01076045
44938
Bacteroidota
TGA
Ser
>WENV170407504
CEUH01141734
44938
Bacteroidota
TGA
Ser
>WENV170407040
CEUH01088893
290994
Bacteroidota
CAT
Met
>WENV170407628
CEUH01147617
290994
Bacteroidota
CAT
Met
>WENV170406243
CEUH01011800
193627
Bacteroidota
TCT
Arg
>WENV170407630
CEUH01147667
193627
Bacteroidota
TCT
Arg
>WENV170406225
CEUH01009545
150454
Bacteroidota
TGT
Thr
>WENV170407085
CEUH01093900
145555
Bacteroidota
GTC
Asp
>WENV170407627
CEUH01147596
145555
Bacteroidota
GTC
Asp
>WENV170406111
CEUH01000437
240901
Bacteroidota
TTT
Lys
>WENV170407002
CEUH01082629
185921
Bacteroidota
GTC
Asp
>WENV170407515
CEUH01142381
185921
Bacteroidota
GTC
Asp
>WENV170406583
CEUH01038795
145507
Bacteroidota
TCT
Arg
>WENV170406811
CEUH01060774
145507
Bacteroidota
TCT
Arg
>WENV170407464
CEUH01139479
127449
Bacteroidota
TAC
Val
>WENV170406128
CEUH01002357
48914
Bacteroidota
TGA
Ser
>WENV170406707
CEUH01050207
103368
Bacteroidota
CAA
Leu
>WENV170406133
CEUH01002822
193473
Bacteroidota
GTC
Asp
>WENV170407863
CEUH01248279
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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