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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170412007
CEUK01002369
147089
Alphaproteobacteria
ACG
Arg
>WENV170412069
CEUK01007587
163860
Alphaproteobacteria
GGG
Pro
>WENV170412089
CEUK01009224
167926
Alphaproteobacteria
CAT
Met
>WENV170412143
CEUK01012370
163860
Alphaproteobacteria
GGG
Pro
>WENV170412170
CEUK01013548
252148
Alphaproteobacteria
TGT
Thr
>WENV170412176
CEUK01014165
267922
Alphaproteobacteria
CCA
Trp
>WENV170412228
CEUK01016303
339606
Alphaproteobacteria
>WENV170412559
CEUK01039059
23561
Alphaproteobacteria
GGA
Ser
>WENV170412600
CEUK01042075
348781
Alphaproteobacteria
GAA
Phe
>WENV170412682
CEUK01048384
150356
Alphaproteobacteria
GTC
Asp
>WENV170412684
CEUK01048424
167926
Alphaproteobacteria
CAT
Met
>WENV170412744
CEUK01052301
160158
Alphaproteobacteria
GAT
Ile
>WENV170412746
CEUK01052548
167926
Alphaproteobacteria
CAT
Met
>WENV170412824
CEUK01059468
161002
Alphaproteobacteria
GTG
His
>WENV170413049
CEUK01074269
113700
Alphaproteobacteria
>WENV170413081
CEUK01077198
163860
Alphaproteobacteria
GGG
Pro
>WENV170413208
CEUK01089332
66752
Alphaproteobacteria
CAG
Leu
>WENV170413272
CEUK01094781
267922
Alphaproteobacteria
CCA
Trp
>WENV170413445
CEUK01109520
45600
Alphaproteobacteria
CAG
Leu
>WENV170413614
CEUK01125810
26652
Alphaproteobacteria
GGA
Ser
>WENV170413661
CEUK01131175
161002
Alphaproteobacteria
GTG
His
>WENV170413704
CEUK01135307
159426
Alphaproteobacteria
CAT
Met
>WENV170413763
CEUK01141850
257573
Alphaproteobacteria
GAA
Phe
>WENV170413765
CEUK01141924
348781
Alphaproteobacteria
GAA
Phe
>WENV170413874
CEUK01155467
339722
Alphaproteobacteria
TTG
Gln
>WENV170414051
CEUK01169722
113700
Alphaproteobacteria
>WENV170414169
CEUK01178117
419996
Alphaproteobacteria
GCA
Cys
>WENV170414217
CEUK01181033
163860
Alphaproteobacteria
GGG
Pro
>WENV170414293
CEUK01184428
257573
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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