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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170417740
CEUL01377367
365250
Alphaproteobacteria
GCC
Gly
>WENV170417378
CEUL01313164
190043
Alphaproteobacteria
CAT
Met
>WENV170415006
CEUL01010579
338282
Alphaproteobacteria
GTT
Asn
>WENV170415355
CEUL01034018
339722
Alphaproteobacteria
TTG
Gln
>WENV170414876
CEUL01002116
283763
Alphaproteobacteria
TGC
Ala
>WENV170416775
CEUL01145365
252148
Alphaproteobacteria
TGT
Thr
>WENV170415301
CEUL01030484
23672
Alphaproteobacteria
GCT
Ser
>WENV170417274
CEUL01277197
254522
Alphaproteobacteria
GAA
Phe
>WENV170416833
CEUL01146822
289655
Alphaproteobacteria
GGC
Ala
>WENV170414943
CEUL01006866
242540
Alphaproteobacteria
TGC
Ala
>WENV170415190
CEUL01022609
339606
Alphaproteobacteria
>WENV170414863
CEUL01001123
412424
Alphaproteobacteria
TCC
Gly
>WENV170416805
CEUL01146225
289664
Alphaproteobacteria
TAC
Val
>WENV170417233
CEUL01261571
243633
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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