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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170421480
CEUN01077590
235887
Gammaproteobacteria
GTG
His
>WENV170423514
CEUN01429159
144810
Gammaproteobacteria
TCG
Arg
>WENV170422165
CEUN01139172
279385
Gammaproteobacteria
TTT
Lys
>WENV170422245
CEUN01145349
235341
Gammaproteobacteria
TGT
Thr
>WENV170422526
CEUN01166796
58822
Gammaproteobacteria
CAA
Leu
>WENV170422781
CEUN01180457
173648
Gammaproteobacteria
TCT
Arg
>WENV170422620
CEUN01173020
144812
Gammaproteobacteria
GGG
Pro
>WENV170420857
CEUN01028392
160030
Gammaproteobacteria
GGG
Pro
>WENV170421143
CEUN01051828
160030
Gammaproteobacteria
GGG
Pro
>WENV170423345
CEUN01393967
23369
Gammaproteobacteria
GCT
Ser
>WENV170421564
CEUN01084807
145196
Gammaproteobacteria
CAT
Met
>WENV170420489
CEUN01005165
240619
Gammaproteobacteria
TGT
Thr
>WENV170423327
CEUN01386451
373590
Gammaproteobacteria
TTG
Gln
>WENV170420886
CEUN01031032
149036
Gammaproteobacteria
CCA
Trp
>WENV170421164
CEUN01053460
149036
Gammaproteobacteria
CCA
Trp
>WENV170420463
CEUN01003410
146791
Gammaproteobacteria
GAC
Val
>WENV170422100
CEUN01133537
145261
Gammaproteobacteria
CAT
Met
>WENV170421281
CEUN01062353
159514
Gammaproteobacteria
TGG
Pro
>WENV170422737
CEUN01178547
145369
Gammaproteobacteria
CGG
Pro
>WENV170422692
CEUN01176913
174801
Gammaproteobacteria
TGG
Pro
>WENV170421663
CEUN01091434
185155
Gammaproteobacteria
CAT
Met
>WENV170420715
CEUN01018723
98737
Gammaproteobacteria
GAG
Leu
>WENV170423081
CEUN01296884
340801
Gammaproteobacteria
CCT
Arg
>WENV170422585
CEUN01170480
426403
Gammaproteobacteria
GCA
Cys
>WENV170420867
CEUN01029206
278046
Gammaproteobacteria
TGT
Thr
>WENV170421828
CEUN01105959
152301
Gammaproteobacteria
GAT
Ile
>WENV170421432
CEUN01074318
269152
Gammaproteobacteria
GTG
His
>WENV170423059
CEUN01287585
341782
Gammaproteobacteria
TTG
Gln
>WENV170423398
CEUN01408316
236973
Gammaproteobacteria
GTT
Asn
>WENV170421218
CEUN01057294
145713
Gammaproteobacteria
CAT
Met
>WENV170422686
CEUN01176764
241136
Gammaproteobacteria
TTG
Gln
>WENV170421470
CEUN01076922
412373
Gammaproteobacteria
GCA
Cys
>WENV170420431
CEUN01001190
425813
Gammaproteobacteria
GCA
Cys
>WENV170422419
CEUN01159427
160378
Gammaproteobacteria
GAC
Val
>WENV170421759
CEUN01099591
184454
Gammaproteobacteria
ACG
Arg
>WENV170420791
CEUN01024537
243921
Gammaproteobacteria
TTT
Lys
>WENV170421183
CEUN01054951
262546
Gammaproteobacteria
TGC
Ala
>WENV170421414
CEUN01073347
257778
Gammaproteobacteria
TAC
Val
>WENV170422049
CEUN01127615
182592
Gammaproteobacteria
GAC
Val
>WENV170420681
CEUN01015763
149037
Gammaproteobacteria
GAC
Val
>WENV170420686
CEUN01016409
149037
Gammaproteobacteria
GAC
Val
>WENV170422826
CEUN01182072
149037
Gammaproteobacteria
GAC
Val
>WENV170422709
CEUN01177605
179790
Gammaproteobacteria
CAT
Met
>WENV170420483
CEUN01004511
411735
Gammaproteobacteria
GCA
Cys
>WENV170422229
CEUN01144323
45411
Gammaproteobacteria
GGA
Ser
>WENV170423513
CEUN01429157
175964
Gammaproteobacteria
CAT
Met
>WENV170422079
CEUN01130747
150297
Gammaproteobacteria
TCT
Arg
>WENV170422711
CEUN01177687
266766
Gammaproteobacteria
TGT
Thr
>WENV170422599
CEUN01171580
58746
Gammaproteobacteria
CAG
Leu
>WENV170421561
CEUN01084601
276263
Gammaproteobacteria
TGC
Ala
>WENV170422234
CEUN01144770
277196
Gammaproteobacteria
GAA
Phe
>WENV170422381
CEUN01156038
144813
Gammaproteobacteria
CCT
Arg
>WENV170420569
CEUN01009655
173617
Gammaproteobacteria
GTC
Asp
>WENV170420701
CEUN01017598
173617
Gammaproteobacteria
GTC
Asp
>WENV170422610
CEUN01172053
150183
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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