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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170424023
CEUO01057539
235837
Gammaproteobacteria
GTT
Asn
>WENV170423891
CEUO01039697
95633
Gammaproteobacteria
GTA
Tyr
>WENV170423938
CEUO01046150
20025
Gammaproteobacteria
GGA
Ser
>WENV170423886
CEUO01039203
58767
Gammaproteobacteria
CAG
Leu
>WENV170424123
CEUO01069454
235516
Gammaproteobacteria
GTG
His
>WENV170424137
CEUO01071127
144981
Gammaproteobacteria
CCG
Arg
>WENV170423763
CEUO01020798
144979
Gammaproteobacteria
CGG
Pro
>WENV170424242
CEUO01088610
195519
Gammaproteobacteria
CAT
Met
>WENV170423864
CEUO01036794
149036
Gammaproteobacteria
CCA
Trp
>WENV170423887
CEUO01039309
149036
Gammaproteobacteria
CCA
Trp
>WENV170424574
CEUO01201111
44886
Gammaproteobacteria
TGA
Ser
>WENV170424418
CEUO01136240
238511
Gammaproteobacteria
TTT
Lys
>WENV170424440
CEUO01148591
145369
Gammaproteobacteria
CGG
Pro
>WENV170423658
CEUO01008874
412799
Gammaproteobacteria
GCA
Cys
>WENV170423679
CEUO01010957
340801
Gammaproteobacteria
CCT
Arg
>WENV170424258
CEUO01089944
95635
Gammaproteobacteria
CAA
Leu
>WENV170423845
CEUO01033429
62501
Gammaproteobacteria
CAG
Leu
>WENV170423846
CEUO01033429
62501
Gammaproteobacteria
CAG
Leu
>WENV170424119
CEUO01068906
269152
Gammaproteobacteria
GTG
His
>WENV170423853
CEUO01034904
235886
Gammaproteobacteria
TTC
Glu
>WENV170424598
CEUO01204758
412463
Gammaproteobacteria
TCC
Gly
>WENV170424559
CEUO01197975
23396
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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