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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170424825
CEUP01015446
237463
Gammaproteobacteria
GTT
Asn
>WENV170424850
CEUP01017505
95633
Gammaproteobacteria
GTA
Tyr
>WENV170425334
CEUP01081114
235887
Gammaproteobacteria
GTG
His
>WENV170424962
CEUP01025598
313881
Gammaproteobacteria
GGC
Ala
>WENV170424788
CEUP01011288
144810
Gammaproteobacteria
TCG
Arg
>WENV170424787
CEUP01011288
253766
Gammaproteobacteria
TTT
Lys
>WENV170425032
CEUP01033991
279385
Gammaproteobacteria
TTT
Lys
>WENV170425075
CEUP01039840
235341
Gammaproteobacteria
TGT
Thr
>WENV170425040
CEUP01035184
147779
Gammaproteobacteria
CAT
Met
>WENV170425407
CEUP01096894
16390
Gammaproteobacteria
GGA
Ser
>WENV170425329
CEUP01077523
58822
Gammaproteobacteria
CAA
Leu
>WENV170424858
CEUP01018035
160030
Gammaproteobacteria
GGG
Pro
>WENV170425068
CEUP01039095
160030
Gammaproteobacteria
GGG
Pro
>WENV170425072
CEUP01039394
23369
Gammaproteobacteria
GCT
Ser
>WENV170424728
CEUP01006691
145367
Gammaproteobacteria
GGG
Pro
>WENV170425269
CEUP01051757
197713
Gammaproteobacteria
CAT
Met
>WENV170425448
CEUP01103610
181949
Gammaproteobacteria
CAT
Met
>WENV170424816
CEUP01014850
144919
Gammaproteobacteria
CCT
Arg
>WENV170425424
CEUP01100526
195519
Gammaproteobacteria
CAT
Met
>WENV170425422
CEUP01100306
373590
Gammaproteobacteria
TTG
Gln
>WENV170425437
CEUP01101524
23732
Gammaproteobacteria
GGA
Ser
>WENV170424995
CEUP01030597
145261
Gammaproteobacteria
CAT
Met
>WENV170425326
CEUP01076850
44873
Gammaproteobacteria
TGA
Ser
>WENV170424636
CEUP01001096
144954
Gammaproteobacteria
ACG
Arg
>WENV170424956
CEUP01025364
145369
Gammaproteobacteria
CGG
Pro
>WENV170424851
CEUP01017543
173326
Gammaproteobacteria
TCT
Arg
>WENV170424645
CEUP01001895
340801
Gammaproteobacteria
CCT
Arg
>WENV170424903
CEUP01020619
162284
Gammaproteobacteria
CCA
Trp
>WENV170425038
CEUP01034894
289927
Gammaproteobacteria
GAA
Phe
>WENV170424810
CEUP01014033
249995
Gammaproteobacteria
TTT
Lys
>WENV170424811
CEUP01014033
249995
Gammaproteobacteria
TTT
Lys
>WENV170424666
CEUP01002530
199268
Gammaproteobacteria
ACG
Arg
>WENV170424688
CEUP01003563
199268
Gammaproteobacteria
ACG
Arg
>WENV170424689
CEUP01003563
199268
Gammaproteobacteria
ACG
Arg
>WENV170424690
CEUP01003563
199268
Gammaproteobacteria
ACG
Arg
>WENV170425277
CEUP01054468
152450
Gammaproteobacteria
GAC
Val
>WENV170425293
CEUP01064496
95635
Gammaproteobacteria
CAA
Leu
>WENV170425046
CEUP01035905
16389
Gammaproteobacteria
TGA
Ser
>WENV170425079
CEUP01039911
56673
Gammaproteobacteria
GGA
Ser
>WENV170425078
CEUP01039840
235344
Gammaproteobacteria
GGT
Thr
>WENV170424859
CEUP01018114
146836
Gammaproteobacteria
CCT
Arg
>WENV170425090
CEUP01041556
235339
Gammaproteobacteria
GTG
His
>WENV170425070
CEUP01039383
235785
Gammaproteobacteria
CAT
Met
>WENV170424781
CEUP01010322
96103
Gammaproteobacteria
CAA
Leu
>WENV170425479
CEUP01104911
236973
Gammaproteobacteria
GTT
Asn
>WENV170425248
CEUP01050262
95613
Gammaproteobacteria
CAA
Leu
>WENV170424911
CEUP01021688
151889
Gammaproteobacteria
CAT
Met
>WENV170424912
CEUP01021858
151889
Gammaproteobacteria
CAT
Met
>WENV170424724
CEUP01005973
243921
Gammaproteobacteria
TTT
Lys
>WENV170424725
CEUP01005973
243921
Gammaproteobacteria
TTT
Lys
>WENV170425098
CEUP01043045
59658
Gammaproteobacteria
CAA
Leu
>WENV170424997
CEUP01030992
20938
Gammaproteobacteria
TGA
Ser
>WENV170424708
CEUP01004993
149037
Gammaproteobacteria
GAC
Val
>WENV170424910
CEUP01021397
149037
Gammaproteobacteria
GAC
Val
>WENV170424638
CEUP01001178
411735
Gammaproteobacteria
GCA
Cys
>WENV170425270
CEUP01051861
45411
Gammaproteobacteria
GGA
Ser
>WENV170425401
CEUP01094857
23396
Gammaproteobacteria
GGA
Ser
>WENV170425160
CEUP01046730
58746
Gammaproteobacteria
CAG
Leu
>WENV170425071
CEUP01039392
144813
Gammaproteobacteria
CCT
Arg
>WENV170425122
CEUP01044392
173617
Gammaproteobacteria
GTC
Asp
>WENV170425089
CEUP01041556
175414
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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