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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170427293
CEUQ01163886
113700
Alphaproteobacteria
>WENV170427724
CEUQ01187825
144964
Alphaproteobacteria
TGG
Pro
>WENV170426654
CEUQ01102230
159305
Alphaproteobacteria
GTC
Asp
>WENV170427652
CEUQ01185624
246184
Alphaproteobacteria
GAA
Phe
>WENV170428714
CEUQ01487983
96210
Alphaproteobacteria
TAG
Leu
>WENV170425518
CEUQ01002368
237740
Alphaproteobacteria
TTT
Lys
>WENV170427683
CEUQ01186802
249928
Alphaproteobacteria
TAC
Val
>WENV170425956
CEUQ01038363
412477
Alphaproteobacteria
GCA
Cys
>WENV170426723
CEUQ01110136
160158
Alphaproteobacteria
GAT
Ile
>WENV170425708
CEUQ01017345
412424
Alphaproteobacteria
TCC
Gly
>WENV170426232
CEUQ01063592
150356
Alphaproteobacteria
GTC
Asp
>WENV170427601
CEUQ01183681
150356
Alphaproteobacteria
GTC
Asp
>WENV170427240
CEUQ01160216
243633
Alphaproteobacteria
CGT
Thr
>WENV170428036
CEUQ01298410
243633
Alphaproteobacteria
CGT
Thr
>WENV170427808
CEUQ01189616
62052
Alphaproteobacteria
GAG
Leu
>WENV170428128
CEUQ01345837
95854
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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