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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170428982
CEUR01018031
147089
Alphaproteobacteria
ACG
Arg
>WENV170428947
CEUR01015164
144964
Alphaproteobacteria
TGG
Pro
>WENV170429080
CEUR01025845
23468
Alphaproteobacteria
GCT
Ser
>WENV170430463
CEUR01320760
339722
Alphaproteobacteria
TTG
Gln
>WENV170430203
CEUR01214708
237740
Alphaproteobacteria
TTT
Lys
>WENV170428917
CEUR01012946
252148
Alphaproteobacteria
TGT
Thr
>WENV170429236
CEUR01040594
252148
Alphaproteobacteria
TGT
Thr
>WENV170429369
CEUR01051981
252148
Alphaproteobacteria
TGT
Thr
>WENV170429552
CEUR01064449
252148
Alphaproteobacteria
TGT
Thr
>WENV170429917
CEUR01079793
252148
Alphaproteobacteria
TGT
Thr
>WENV170428810
CEUR01005051
242540
Alphaproteobacteria
TGC
Ala
>WENV170430576
CEUR01334299
338529
Alphaproteobacteria
GTT
Asn
>WENV170428903
CEUR01011748
339606
Alphaproteobacteria
>WENV170429519
CEUR01062970
342846
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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