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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170428865
CEUR01009232
127458
Bacteroidota
GAC
Val
>WENV170428879
CEUR01010180
60611
Bacteroidota
GCT
Ser
>WENV170429956
CEUR01080459
60611
Bacteroidota
GCT
Ser
>WENV170429621
CEUR01069563
96678
Bacteroidota
TAG
Leu
>WENV170430094
CEUR01126114
127414
Bacteroidota
TGG
Pro
>WENV170429398
CEUR01053842
44938
Bacteroidota
TGA
Ser
>WENV170428960
CEUR01017033
95727
Bacteroidota
TAG
Leu
>WENV170428748
CEUR01000915
17496
Bacteroidota
GGA
Ser
>WENV170429924
CEUR01079920
246641
Bacteroidota
GAA
Phe
>WENV170428987
CEUR01018533
240901
Bacteroidota
TTT
Lys
>WENV170429312
CEUR01046653
240901
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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