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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170437204
CEUU01020253
147779
Gammaproteobacteria
CAT
Met
>WENV170437689
CEUU01058577
236480
Gammaproteobacteria
GTG
His
>WENV170438390
CEUU01114493
145260
Gammaproteobacteria
CAT
Met
>WENV170437058
CEUU01011206
160030
Gammaproteobacteria
GGG
Pro
>WENV170438567
CEUU01184999
59211
Gammaproteobacteria
TAA
Leu
>WENV170438124
CEUU01100868
149036
Gammaproteobacteria
CCA
Trp
>WENV170438357
CEUU01114054
149036
Gammaproteobacteria
CCA
Trp
>WENV170437947
CEUU01084174
426403
Gammaproteobacteria
GCA
Cys
>WENV170438624
CEUU01207933
289927
Gammaproteobacteria
GAA
Phe
>WENV170437687
CEUU01058577
149038
Gammaproteobacteria
TGG
Pro
>WENV170437234
CEUU01022761
240084
Gammaproteobacteria
GGT
Thr
>WENV170437934
CEUU01082995
173040
Gammaproteobacteria
GAC
Val
>WENV170437688
CEUU01058577
154796
Gammaproteobacteria
TCT
Arg
>WENV170438236
CEUU01109263
149037
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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