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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170444169
CEUX01065716
147373
Gammaproteobacteria
CAT
Met
>WENV170443954
CEUX01034914
95985
Gammaproteobacteria
TAG
Leu
>WENV170443800
CEUX01015400
113631
Gammaproteobacteria
GTA
Tyr
>WENV170443994
CEUX01041285
147779
Gammaproteobacteria
CAT
Met
>WENV170444016
CEUX01043803
235516
Gammaproteobacteria
GTG
His
>WENV170444444
CEUX01102829
145364
Gammaproteobacteria
GGG
Pro
>WENV170443729
CEUX01007055
160030
Gammaproteobacteria
GGG
Pro
>WENV170444519
CEUX01129768
145196
Gammaproteobacteria
CAT
Met
>WENV170444164
CEUX01065234
59440
Gammaproteobacteria
TAA
Leu
>WENV170443799
CEUX01015400
240619
Gammaproteobacteria
TGT
Thr
>WENV170444362
CEUX01096813
144979
Gammaproteobacteria
CGG
Pro
>WENV170444729
CEUX01211474
152455
Gammaproteobacteria
CAT
Met
>WENV170443699
CEUX01002249
149036
Gammaproteobacteria
CCA
Trp
>WENV170443898
CEUX01029310
149036
Gammaproteobacteria
CCA
Trp
>WENV170444627
CEUX01181925
44886
Gammaproteobacteria
TGA
Ser
>WENV170444460
CEUX01103487
24366
Gammaproteobacteria
GGA
Ser
>WENV170443868
CEUX01026540
340311
Gammaproteobacteria
>WENV170443783
CEUX01013204
147025
Gammaproteobacteria
CAT
Met
>WENV170444344
CEUX01094548
147025
Gammaproteobacteria
CAT
Met
>WENV170444090
CEUX01052514
349095
Gammaproteobacteria
TCC
Gly
>WENV170444199
CEUX01069911
149073
Gammaproteobacteria
CAT
Met
>WENV170443735
CEUX01007752
412799
Gammaproteobacteria
GCA
Cys
>WENV170444163
CEUX01065234
412799
Gammaproteobacteria
GCA
Cys
>WENV170443749
CEUX01008317
6976
Gammaproteobacteria
GCT
Ser
>WENV170443731
CEUX01007304
95635
Gammaproteobacteria
CAA
Leu
>WENV170443821
CEUX01019021
147777
Gammaproteobacteria
TCT
Arg
>WENV170444121
CEUX01057400
59830
Gammaproteobacteria
CAA
Leu
>WENV170443820
CEUX01019021
147055
Gammaproteobacteria
TGG
Pro
>WENV170444366
CEUX01097514
238510
Gammaproteobacteria
GCC
Gly
>WENV170444168
CEUX01065679
96103
Gammaproteobacteria
CAA
Leu
>WENV170443801
CEUX01015400
412476
Gammaproteobacteria
TCC
Gly
>WENV170444443
CEUX01102719
338337
Gammaproteobacteria
CCT
Arg
>WENV170444151
CEUX01061689
241136
Gammaproteobacteria
TTG
Gln
>WENV170443953
CEUX01034914
147123
Gammaproteobacteria
CAT
Met
>WENV170444076
CEUX01050908
151889
Gammaproteobacteria
CAT
Met
>WENV170444476
CEUX01104454
339597
Gammaproteobacteria
CCG
Arg
>WENV170444411
CEUX01101572
149037
Gammaproteobacteria
GAC
Val
>WENV170444194
CEUX01069207
237159
Gammaproteobacteria
GTG
His
>WENV170444139
CEUX01060340
45411
Gammaproteobacteria
GGA
Ser
>WENV170443748
CEUX01008317
16460
Gammaproteobacteria
TGA
Ser
>WENV170444385
CEUX01099630
16460
Gammaproteobacteria
TGA
Ser
>WENV170443711
CEUX01004935
147050
Gammaproteobacteria
GAT
Ile
>WENV170443947
CEUX01034245
23396
Gammaproteobacteria
GGA
Ser
>WENV170443703
CEUX01003070
147776
Gammaproteobacteria
ACG
Arg
>WENV170443704
CEUX01003070
147776
Gammaproteobacteria
ACG
Arg
>WENV170443802
CEUX01015400
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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