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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170447400
CEUY01206043
365250
Alphaproteobacteria
GCC
Gly
>WENV170444924
CEUY01011744
149985
Alphaproteobacteria
ACG
Arg
>WENV170445995
CEUY01084241
144964
Alphaproteobacteria
TGG
Pro
>WENV170446429
CEUY01129971
159305
Alphaproteobacteria
GTC
Asp
>WENV170447572
CEUY01286172
147577
Alphaproteobacteria
CCG
Arg
>WENV170447697
CEUY01353714
199865
Alphaproteobacteria
CAT
Met
>WENV170447835
CEUY01413523
95928
Alphaproteobacteria
TAG
Leu
>WENV170446363
CEUY01120662
200119
Alphaproteobacteria
CAT
Met
>WENV170447302
CEUY01203752
200119
Alphaproteobacteria
CAT
Met
>WENV170446108
CEUY01094857
237740
Alphaproteobacteria
TTT
Lys
>WENV170445166
CEUY01023295
412260
Alphaproteobacteria
TCC
Gly
>WENV170447139
CEUY01194858
412260
Alphaproteobacteria
TCC
Gly
>WENV170447510
CEUY01255844
339750
Alphaproteobacteria
GGT
Thr
>WENV170447743
CEUY01378019
148158
Alphaproteobacteria
ACG
Arg
>WENV170445515
CEUY01044120
192195
Alphaproteobacteria
GTC
Asp
>WENV170446002
CEUY01084935
280207
Alphaproteobacteria
TGC
Ala
>WENV170446837
CEUY01171272
319925
Alphaproteobacteria
TGT
Thr
>WENV170446910
CEUY01178765
369678
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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