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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170452932
CEUZ01286228
163492
Gammaproteobacteria
TGG
Pro
>WENV170452516
CEUZ01267910
249887
Gammaproteobacteria
GGT
Thr
>WENV170452730
CEUZ01277491
61925
Gammaproteobacteria
TAA
Leu
>WENV170452956
CEUZ01286886
171935
Gammaproteobacteria
ACG
Arg
>WENV170450539
CEUZ01123191
269248
Gammaproteobacteria
CCA
Trp
>WENV170452609
CEUZ01271985
235452
Gammaproteobacteria
GAA
Phe
>WENV170450062
CEUZ01092804
146791
Gammaproteobacteria
GAC
Val
>WENV170450859
CEUZ01145558
17329
Gammaproteobacteria
TGA
Ser
>WENV170452972
CEUZ01287237
45345
Gammaproteobacteria
GGA
Ser
>WENV170450261
CEUZ01103702
252289
Gammaproteobacteria
TTT
Lys
>WENV170450262
CEUZ01103702
252289
Gammaproteobacteria
TTT
Lys
>WENV170450906
CEUZ01148887
173040
Gammaproteobacteria
GAC
Val
>WENV170450960
CEUZ01152880
238372
Gammaproteobacteria
CCT
Arg
>WENV170453645
CEUZ01508494
128930
Gammaproteobacteria
GTC
Asp
>WENV170449005
CEUZ01039235
203054
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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