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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170457839
CEVB01000233
144979
Gammaproteobacteria
CGG
Pro
>WENV170457883
CEVB01004982
144982
Gammaproteobacteria
TGG
Pro
>WENV170457889
CEVB01005249
185163
Gammaproteobacteria
ACG
Arg
>WENV170457888
CEVB01005249
10767
Gammaproteobacteria
GCT
Ser
>WENV170457901
CEVB01006416
24366
Gammaproteobacteria
GGA
Ser
>WENV170457903
CEVB01006545
44886
Gammaproteobacteria
TGA
Ser
>WENV170457939
CEVB01011119
235516
Gammaproteobacteria
GTG
His
>WENV170457940
CEVB01011119
107766
Gammaproteobacteria
TAG
Leu
>WENV170457955
CEVB01012832
174071
Gammaproteobacteria
ACG
Arg
>WENV170457956
CEVB01012832
174071
Gammaproteobacteria
ACG
Arg
>WENV170458053
CEVB01026886
269152
Gammaproteobacteria
GTG
His
>WENV170458068
CEVB01029883
62501
Gammaproteobacteria
CAG
Leu
>WENV170458069
CEVB01029883
62501
Gammaproteobacteria
CAG
Leu
>WENV170458100
CEVB01032310
238510
Gammaproteobacteria
GCC
Gly
>WENV170458101
CEVB01032310
413604
Gammaproteobacteria
GCA
Cys
>WENV170458113
CEVB01033609
149037
Gammaproteobacteria
GAC
Val
>WENV170458140
CEVB01036598
199268
Gammaproteobacteria
ACG
Arg
>WENV170458141
CEVB01036598
199268
Gammaproteobacteria
ACG
Arg
>WENV170458168
CEVB01041858
144793
Gammaproteobacteria
GAC
Val
>WENV170458176
CEVB01043724
165036
Gammaproteobacteria
CCA
Trp
>WENV170458181
CEVB01044703
173617
Gammaproteobacteria
GTC
Asp
>WENV170458214
CEVB01050143
426403
Gammaproteobacteria
GCA
Cys
>WENV170458224
CEVB01051035
235837
Gammaproteobacteria
GTT
Asn
>WENV170458263
CEVB01059553
152455
Gammaproteobacteria
CAT
Met
>WENV170458351
CEVB01069679
95633
Gammaproteobacteria
GTA
Tyr
>WENV170458352
CEVB01070080
23396
Gammaproteobacteria
GGA
Ser
>WENV170458389
CEVB01074022
340801
Gammaproteobacteria
CCT
Arg
>WENV170458509
CEVB01082407
95635
Gammaproteobacteria
CAA
Leu
>WENV170458528
CEVB01087036
144981
Gammaproteobacteria
CCG
Arg
>WENV170458588
CEVB01119933
58767
Gammaproteobacteria
CAG
Leu
>WENV170458623
CEVB01135538
195519
Gammaproteobacteria
CAT
Met
>WENV170458726
CEVB01158032
338337
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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