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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170459230
CEVC01037308
147089
Alphaproteobacteria
ACG
Arg
>WENV170459696
CEVC01076996
113700
Alphaproteobacteria
>WENV170459144
CEVC01030737
144964
Alphaproteobacteria
TGG
Pro
>WENV170460327
CEVC01140062
144964
Alphaproteobacteria
TGG
Pro
>WENV170459359
CEVC01048351
338282
Alphaproteobacteria
GTT
Asn
>WENV170459148
CEVC01031315
147083
Alphaproteobacteria
GGG
Pro
>WENV170460268
CEVC01133540
147083
Alphaproteobacteria
GGG
Pro
>WENV170460280
CEVC01135164
147083
Alphaproteobacteria
GGG
Pro
>WENV170460863
CEVC01172371
159426
Alphaproteobacteria
CAT
Met
>WENV170459893
CEVC01093666
339290
Alphaproteobacteria
GGT
Thr
>WENV170459897
CEVC01094228
339290
Alphaproteobacteria
GGT
Thr
>WENV170460658
CEVC01167435
339722
Alphaproteobacteria
TTG
Gln
>WENV170461336
CEVC01355854
339722
Alphaproteobacteria
TTG
Gln
>WENV170461221
CEVC01327761
249907
Alphaproteobacteria
CGC
Ala
>WENV170459195
CEVC01034764
252148
Alphaproteobacteria
TGT
Thr
>WENV170459848
CEVC01089332
252148
Alphaproteobacteria
TGT
Thr
>WENV170460362
CEVC01144452
252148
Alphaproteobacteria
TGT
Thr
>WENV170460436
CEVC01151649
252148
Alphaproteobacteria
TGT
Thr
>WENV170460452
CEVC01153483
252148
Alphaproteobacteria
TGT
Thr
>WENV170460746
CEVC01170287
252148
Alphaproteobacteria
TGT
Thr
>WENV170459875
CEVC01091912
23672
Alphaproteobacteria
GCT
Ser
>WENV170459409
CEVC01052589
348781
Alphaproteobacteria
GAA
Phe
>WENV170460159
CEVC01120884
348781
Alphaproteobacteria
GAA
Phe
>WENV170460346
CEVC01142312
160158
Alphaproteobacteria
GAT
Ile
>WENV170460273
CEVC01134227
152248
Alphaproteobacteria
TGG
Pro
>WENV170459950
CEVC01099114
150356
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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