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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170459798
CEVC01084706
235887
Gammaproteobacteria
GTG
His
>WENV170460213
CEVC01127065
58767
Gammaproteobacteria
CAG
Leu
>WENV170460992
CEVC01221902
58767
Gammaproteobacteria
CAG
Leu
>WENV170460507
CEVC01157780
145368
Gammaproteobacteria
CCT
Arg
>WENV170461128
CEVC01297309
58822
Gammaproteobacteria
CAA
Leu
>WENV170460298
CEVC01137124
61925
Gammaproteobacteria
TAA
Leu
>WENV170458832
CEVC01007729
144816
Gammaproteobacteria
TGG
Pro
>WENV170461205
CEVC01319734
46594
Gammaproteobacteria
GGA
Ser
>WENV170459398
CEVC01051241
145196
Gammaproteobacteria
CAT
Met
>WENV170460983
CEVC01217927
59440
Gammaproteobacteria
TAA
Leu
>WENV170459254
CEVC01038769
240642
Gammaproteobacteria
GTT
Asn
>WENV170460456
CEVC01154410
16284
Gammaproteobacteria
TGA
Ser
>WENV170460792
CEVC01171441
98737
Gammaproteobacteria
GAG
Leu
>WENV170460982
CEVC01217927
412799
Gammaproteobacteria
GCA
Cys
>WENV170458817
CEVC01006485
245841
Gammaproteobacteria
GAA
Phe
>WENV170460802
CEVC01171583
245841
Gammaproteobacteria
GAA
Phe
>WENV170461198
CEVC01317447
145562
Gammaproteobacteria
CAT
Met
>WENV170459823
CEVC01086020
235342
Gammaproteobacteria
TGC
Ala
>WENV170461145
CEVC01300491
144817
Gammaproteobacteria
TCT
Arg
>WENV170458850
CEVC01009559
152301
Gammaproteobacteria
GAT
Ile
>WENV170459121
CEVC01028464
238510
Gammaproteobacteria
GCC
Gly
>WENV170458926
CEVC01014343
341782
Gammaproteobacteria
TTG
Gln
>WENV170458959
CEVC01016918
237418
Gammaproteobacteria
GTT
Asn
>WENV170459104
CEVC01027208
128930
Gammaproteobacteria
GTC
Asp
>WENV170459475
CEVC01056747
243485
Gammaproteobacteria
TGT
Thr
>WENV170460301
CEVC01137239
243485
Gammaproteobacteria
TGT
Thr
>WENV170458780
CEVC01003432
247088
Gammaproteobacteria
CCA
Trp
>WENV170459214
CEVC01035856
247088
Gammaproteobacteria
CCA
Trp
>WENV170459414
CEVC01052935
247088
Gammaproteobacteria
CCA
Trp
>WENV170460092
CEVC01112606
247088
Gammaproteobacteria
CCA
Trp
>WENV170461076
CEVC01269311
237159
Gammaproteobacteria
GTG
His
>WENV170459898
CEVC01094283
411735
Gammaproteobacteria
GCA
Cys
>WENV170461075
CEVC01269311
150297
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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