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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170462766
CEVD01085471
365250
Alphaproteobacteria
GCC
Gly
>WENV170465112
CEVD01400377
237493
Alphaproteobacteria
CCA
Trp
>WENV170465035
CEVD01369655
159305
Alphaproteobacteria
GTC
Asp
>WENV170464989
CEVD01350405
257573
Alphaproteobacteria
GAA
Phe
>WENV170464923
CEVD01308020
176908
Alphaproteobacteria
GTC
Asp
>WENV170465132
CEVD01407318
421153
Alphaproteobacteria
>WENV170463310
CEVD01129713
162801
Alphaproteobacteria
GTG
His
>WENV170463125
CEVD01115046
200119
Alphaproteobacteria
CAT
Met
>WENV170463202
CEVD01120909
339725
Alphaproteobacteria
GAA
Phe
>WENV170463481
CEVD01147541
258175
Alphaproteobacteria
CGC
Ala
>WENV170462964
CEVD01099321
254522
Alphaproteobacteria
GAA
Phe
>WENV170464519
CEVD01215947
319925
Alphaproteobacteria
TGT
Thr
>WENV170463430
CEVD01143358
412281
Alphaproteobacteria
CTG
Gln
>WENV170464815
CEVD01239099
150194
Alphaproteobacteria
TCT
Arg
>WENV170464836
CEVD01257434
147289
Alphaproteobacteria
GTC
Asp
>WENV170464109
CEVD01195185
62052
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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