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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170473433
CEVH01036618
338282
Alphaproteobacteria
GTT
Asn
>WENV170473463
CEVH01039947
200119
Alphaproteobacteria
CAT
Met
>WENV170473466
CEVH01040229
266073
Alphaproteobacteria
TTT
Lys
>WENV170473467
CEVH01040490
369678
Alphaproteobacteria
GGT
Thr
>WENV170473487
CEVH01041652
282595
Alphaproteobacteria
CCA
Trp
>WENV170473490
CEVH01042126
276379
Alphaproteobacteria
TGC
Ala
>WENV170473580
CEVH01050076
147089
Alphaproteobacteria
ACG
Arg
>WENV170473618
CEVH01053790
163860
Alphaproteobacteria
GGG
Pro
>WENV170473639
CEVH01056958
192195
Alphaproteobacteria
GTC
Asp
>WENV170473674
CEVH01061564
339606
Alphaproteobacteria
>WENV170473756
CEVH01069554
369678
Alphaproteobacteria
GGT
Thr
>WENV170473926
CEVH01085403
251191
Alphaproteobacteria
TAC
Val
>WENV170473927
CEVH01085403
150356
Alphaproteobacteria
GTC
Asp
>WENV170473970
CEVH01088076
161002
Alphaproteobacteria
GTG
His
>WENV170474166
CEVH01107815
319925
Alphaproteobacteria
TGT
Thr
>WENV170474168
CEVH01108007
176908
Alphaproteobacteria
GTC
Asp
>WENV170474174
CEVH01108420
195945
Alphaproteobacteria
GAT
Ile
>WENV170474196
CEVH01110737
195945
Alphaproteobacteria
GAT
Ile
>WENV170474199
CEVH01110838
176908
Alphaproteobacteria
GTC
Asp
>WENV170474370
CEVH01131814
148353
Alphaproteobacteria
CAT
Met
>WENV170474394
CEVH01134640
266073
Alphaproteobacteria
TTT
Lys
>WENV170474626
CEVH01159430
348781
Alphaproteobacteria
GAA
Phe
>WENV170475057
CEVH01203813
352191
Alphaproteobacteria
GGT
Thr
>WENV170475158
CEVH01257454
23648
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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