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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170476842
CEVI01222981
381459
Alphaproteobacteria
CAC
Val
>WENV170475655
CEVI01021515
237493
Alphaproteobacteria
CCA
Trp
>WENV170476235
CEVI01088683
80917
Alphaproteobacteria
CAG
Leu
>WENV170475572
CEVI01013224
59361
Alphaproteobacteria
GAG
Leu
>WENV170476156
CEVI01077638
267922
Alphaproteobacteria
CCA
Trp
>WENV170476621
CEVI01137318
193550
Alphaproteobacteria
TCT
Arg
>WENV170476530
CEVI01120030
159305
Alphaproteobacteria
GTC
Asp
>WENV170476529
CEVI01119907
339724
Alphaproteobacteria
TTG
Gln
>WENV170475627
CEVI01018210
421153
Alphaproteobacteria
>WENV170476015
CEVI01060774
421153
Alphaproteobacteria
>WENV170476389
CEVI01106047
23671
Alphaproteobacteria
CGA
Ser
>WENV170476280
CEVI01093379
339723
Alphaproteobacteria
>WENV170476252
CEVI01090898
147083
Alphaproteobacteria
GGG
Pro
>WENV170476246
CEVI01090175
147577
Alphaproteobacteria
CCG
Arg
>WENV170476521
CEVI01118825
162801
Alphaproteobacteria
GTG
His
>WENV170475985
CEVI01057560
383873
Alphaproteobacteria
>WENV170476355
CEVI01101750
339722
Alphaproteobacteria
TTG
Gln
>WENV170476268
CEVI01091682
80918
Alphaproteobacteria
GAG
Leu
>WENV170476445
CEVI01111852
147334
Alphaproteobacteria
CAT
Met
>WENV170476680
CEVI01164026
338289
Alphaproteobacteria
GAC
Val
>WENV170475808
CEVI01036689
193197
Alphaproteobacteria
ACG
Arg
>WENV170476736
CEVI01187197
417107
Alphaproteobacteria
GCA
Cys
>WENV170476207
CEVI01083333
412279
Alphaproteobacteria
CCC
Gly
>WENV170476477
CEVI01115584
147287
Alphaproteobacteria
TGG
Pro
>WENV170475677
CEVI01023328
339725
Alphaproteobacteria
GAA
Phe
>WENV170476479
CEVI01115915
258175
Alphaproteobacteria
CGC
Ala
>WENV170476302
CEVI01094597
23672
Alphaproteobacteria
GCT
Ser
>WENV170476340
CEVI01099726
161002
Alphaproteobacteria
GTG
His
>WENV170476086
CEVI01069662
65244
Alphaproteobacteria
CAG
Leu
>WENV170476802
CEVI01214329
80837
Alphaproteobacteria
TAA
Leu
>WENV170475854
CEVI01041391
237196
Alphaproteobacteria
CGT
Thr
>WENV170476058
CEVI01065696
432316
Alphaproteobacteria
GCA
Cys
>WENV170476324
CEVI01097733
147283
Alphaproteobacteria
GTG
His
>WENV170476687
CEVI01167821
96322
Alphaproteobacteria
CAA
Leu
>WENV170475993
CEVI01058307
412281
Alphaproteobacteria
CTG
Gln
>WENV170476267
CEVI01091524
412281
Alphaproteobacteria
CTG
Gln
>WENV170475670
CEVI01022529
369678
Alphaproteobacteria
GGT
Thr
>WENV170475844
CEVI01040520
339609
Alphaproteobacteria
GGT
Thr
>WENV170476766
CEVI01205527
113715
Alphaproteobacteria
TAG
Leu
>WENV170476573
CEVI01123371
21074
Alphaproteobacteria
GGA
Ser
>WENV170476814
CEVI01216733
114040
Alphaproteobacteria
CAA
Leu
>WENV170476408
CEVI01107737
377327
Alphaproteobacteria
GCC
Gly
>WENV170476522
CEVI01118826
191695
Alphaproteobacteria
CCT
Arg
>WENV170476070
CEVI01067743
147286
Alphaproteobacteria
CGG
Pro
>WENV170476541
CEVI01121260
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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