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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170475466
CEVI01002574
235837
Gammaproteobacteria
GTT
Asn
>WENV170475548
CEVI01011631
20025
Gammaproteobacteria
GGA
Ser
>WENV170475697
CEVI01025302
20025
Gammaproteobacteria
GGA
Ser
>WENV170476270
CEVI01091825
20025
Gammaproteobacteria
GGA
Ser
>WENV170476111
CEVI01072961
299821
Gammaproteobacteria
TTC
Glu
>WENV170475864
CEVI01043110
147160
Gammaproteobacteria
ACG
Arg
>WENV170475625
CEVI01018106
147048
Gammaproteobacteria
CCA
Trp
>WENV170476532
CEVI01120273
279385
Gammaproteobacteria
TTT
Lys
>WENV170475907
CEVI01048997
283668
Gammaproteobacteria
TTT
Lys
>WENV170475705
CEVI01026360
160030
Gammaproteobacteria
GGG
Pro
>WENV170476545
CEVI01121979
269248
Gammaproteobacteria
CCA
Trp
>WENV170476468
CEVI01114463
163940
Gammaproteobacteria
CCG
Arg
>WENV170475435
CEVI01000265
185163
Gammaproteobacteria
ACG
Arg
>WENV170475561
CEVI01012591
240619
Gammaproteobacteria
TGT
Thr
>WENV170476230
CEVI01087657
149036
Gammaproteobacteria
CCA
Trp
>WENV170475687
CEVI01024339
149036
Gammaproteobacteria
CCA
Trp
>WENV170475456
CEVI01001901
145261
Gammaproteobacteria
CAT
Met
>WENV170475953
CEVI01053174
145369
Gammaproteobacteria
CGG
Pro
>WENV170476501
CEVI01117787
174801
Gammaproteobacteria
TGG
Pro
>WENV170475707
CEVI01026531
164116
Gammaproteobacteria
TCT
Arg
>WENV170475863
CEVI01043110
6976
Gammaproteobacteria
GCT
Ser
>WENV170475785
CEVI01033052
426403
Gammaproteobacteria
GCA
Cys
>WENV170476242
CEVI01089271
95750
Gammaproteobacteria
TAG
Leu
>WENV170475914
CEVI01049814
419491
Gammaproteobacteria
CTG
Gln
>WENV170476011
CEVI01059989
199268
Gammaproteobacteria
ACG
Arg
>WENV170476012
CEVI01059989
199268
Gammaproteobacteria
ACG
Arg
>WENV170475793
CEVI01033556
147696
Gammaproteobacteria
CAT
Met
>WENV170476291
CEVI01094192
149038
Gammaproteobacteria
TGG
Pro
>WENV170476031
CEVI01062134
247974
Gammaproteobacteria
CCA
Trp
>WENV170475743
CEVI01028265
269152
Gammaproteobacteria
GTG
His
>WENV170475706
CEVI01026531
147055
Gammaproteobacteria
TGG
Pro
>WENV170475563
CEVI01012591
412476
Gammaproteobacteria
TCC
Gly
>WENV170476148
CEVI01075840
10767
Gammaproteobacteria
GCT
Ser
>WENV170476425
CEVI01109124
147051
Gammaproteobacteria
CAT
Met
>WENV170476199
CEVI01082337
145713
Gammaproteobacteria
CAT
Met
>WENV170476543
CEVI01121780
241136
Gammaproteobacteria
TTG
Gln
>WENV170475515
CEVI01007086
250885
Gammaproteobacteria
TGC
Ala
>WENV170475843
CEVI01040436
151889
Gammaproteobacteria
CAT
Met
>WENV170475856
CEVI01041915
151889
Gammaproteobacteria
CAT
Met
>WENV170476564
CEVI01122925
238372
Gammaproteobacteria
CCT
Arg
>WENV170476102
CEVI01071255
128930
Gammaproteobacteria
GTC
Asp
>WENV170476418
CEVI01108507
243485
Gammaproteobacteria
TGT
Thr
>WENV170476403
CEVI01106925
293332
Gammaproteobacteria
GAA
Phe
>WENV170476460
CEVI01113539
203054
Gammaproteobacteria
ACG
Arg
>WENV170475653
CEVI01020993
149037
Gammaproteobacteria
GAC
Val
>WENV170476852
CEVI01225596
411735
Gammaproteobacteria
GCA
Cys
>WENV170475594
CEVI01015652
45411
Gammaproteobacteria
GGA
Ser
>WENV170476433
CEVI01110249
45411
Gammaproteobacteria
GGA
Ser
>WENV170476198
CEVI01082016
16460
Gammaproteobacteria
TGA
Ser
>WENV170476376
CEVI01105026
175964
Gammaproteobacteria
CAT
Met
>WENV170475661
CEVI01021792
266766
Gammaproteobacteria
TGT
Thr
>WENV170475741
CEVI01028264
173617
Gammaproteobacteria
GTC
Asp
>WENV170475564
CEVI01012591
239187
Gammaproteobacteria
GGT
Thr
>WENV170476286
CEVI01094025
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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