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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170479083
CEVK01167427
183605
Gammaproteobacteria
CCG
Arg
>WENV170478352
CEVK01038030
312287
Gammaproteobacteria
TGT
Thr
>WENV170479076
CEVK01165716
144810
Gammaproteobacteria
TCG
Arg
>WENV170479075
CEVK01165716
253766
Gammaproteobacteria
TTT
Lys
>WENV170478847
CEVK01100675
149035
Gammaproteobacteria
CCG
Arg
>WENV170478692
CEVK01081361
236013
Gammaproteobacteria
TGC
Ala
>WENV170478087
CEVK01009826
185163
Gammaproteobacteria
ACG
Arg
>WENV170478088
CEVK01009826
185163
Gammaproteobacteria
ACG
Arg
>WENV170478396
CEVK01043909
322642
Gammaproteobacteria
GGT
Thr
>WENV170478734
CEVK01086568
322642
Gammaproteobacteria
GGT
Thr
>WENV170478771
CEVK01090940
340801
Gammaproteobacteria
CCT
Arg
>WENV170478126
CEVK01014666
199268
Gammaproteobacteria
ACG
Arg
>WENV170478762
CEVK01089837
247974
Gammaproteobacteria
CCA
Trp
>WENV170478109
CEVK01013031
250885
Gammaproteobacteria
TGC
Ala
>WENV170478732
CEVK01086456
250885
Gammaproteobacteria
TGC
Ala
>WENV170478904
CEVK01105613
151889
Gammaproteobacteria
CAT
Met
>WENV170479230
CEVK01207931
45411
Gammaproteobacteria
GGA
Ser
>WENV170478066
CEVK01007549
147117
Gammaproteobacteria
GTC
Asp
>WENV170478466
CEVK01053782
276263
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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