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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170480746
CEVL01134455
154268
Gammaproteobacteria
ACG
Arg
>WENV170481115
CEVL01166465
199859
Gammaproteobacteria
CAT
Met
>WENV170479821
CEVL01041313
247088
Gammaproteobacteria
CCA
Trp
>WENV170481154
CEVL01168928
150183
Gammaproteobacteria
CCG
Arg
>WENV170480927
CEVL01149778
146791
Gammaproteobacteria
GAC
Val
>WENV170481816
CEVL01351126
108171
Gammaproteobacteria
GTA
Tyr
>WENV170479555
CEVL01022145
128930
Gammaproteobacteria
GTC
Asp
>WENV170481216
CEVL01172837
59211
Gammaproteobacteria
TAA
Leu
>WENV170481328
CEVL01179423
319098
Gammaproteobacteria
TAC
Val
>WENV170481638
CEVL01298078
250885
Gammaproteobacteria
TGC
Ala
>WENV170480888
CEVL01146617
146435
Gammaproteobacteria
TGG
Pro
>WENV170481284
CEVL01177509
198797
Gammaproteobacteria
TGG
Pro
>WENV170481672
CEVL01310750
237421
Gammaproteobacteria
TGT
Thr
>WENV170481617
CEVL01292856
341782
Gammaproteobacteria
TTG
Gln
>WENV170479437
CEVL01012509
283668
Gammaproteobacteria
TTT
Lys
>WENV170480612
CEVL01121584
244202
Gammaproteobacteria
TTT
Lys
>WENV170481261
CEVL01175845
245602
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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