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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170485102
CEVN01074357
351461
Alphaproteobacteria
TTG
Gln
>WENV170486455
CEVN01272627
251191
Alphaproteobacteria
TAC
Val
>WENV170485118
CEVN01075951
99726
Alphaproteobacteria
TAG
Leu
>WENV170485854
CEVN01144452
144891
Alphaproteobacteria
CAT
Met
>WENV170486027
CEVN01155115
66752
Alphaproteobacteria
CAG
Leu
>WENV170485550
CEVN01116434
144964
Alphaproteobacteria
TGG
Pro
>WENV170485274
CEVN01091206
109657
Alphaproteobacteria
TAG
Leu
>WENV170484976
CEVN01063823
257573
Alphaproteobacteria
GAA
Phe
>WENV170485101
CEVN01074357
199776
Alphaproteobacteria
CGG
Pro
>WENV170485456
CEVN01107228
31286
Alphaproteobacteria
GGA
Ser
>WENV170484472
CEVN01023953
435528
Alphaproteobacteria
GCA
Cys
>WENV170485911
CEVN01149171
239119
Alphaproteobacteria
CGT
Thr
>WENV170486753
CEVN01362427
190043
Alphaproteobacteria
CAT
Met
>WENV170485585
CEVN01119402
338282
Alphaproteobacteria
GTT
Asn
>WENV170486761
CEVN01363448
339846
Alphaproteobacteria
GAC
Val
>WENV170485531
CEVN01114710
338289
Alphaproteobacteria
GAC
Val
>WENV170484411
CEVN01020220
148265
Alphaproteobacteria
CCT
Arg
>WENV170485335
CEVN01097819
283763
Alphaproteobacteria
TGC
Ala
>WENV170485114
CEVN01075409
151730
Alphaproteobacteria
CCG
Arg
>WENV170486070
CEVN01156841
161002
Alphaproteobacteria
GTG
His
>WENV170484419
CEVN01020547
339883
Alphaproteobacteria
TTG
Gln
>WENV170485637
CEVN01125292
352191
Alphaproteobacteria
GGT
Thr
>WENV170484235
CEVN01007308
319925
Alphaproteobacteria
TGT
Thr
>WENV170485607
CEVN01121558
319925
Alphaproteobacteria
TGT
Thr
>WENV170486104
CEVN01157721
319925
Alphaproteobacteria
TGT
Thr
>WENV170486107
CEVN01157777
319925
Alphaproteobacteria
TGT
Thr
>WENV170484736
CEVN01041324
266073
Alphaproteobacteria
TTT
Lys
>WENV170484187
CEVN01003641
369678
Alphaproteobacteria
GGT
Thr
>WENV170485709
CEVN01132925
339609
Alphaproteobacteria
GGT
Thr
>WENV170485506
CEVN01112134
174372
Alphaproteobacteria
CAT
Met
>WENV170485073
CEVN01071817
294405
Alphaproteobacteria
CCA
Trp
>WENV170486475
CEVN01282453
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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