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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170487410
CEVO01053776
340312
Alphaproteobacteria
TTG
Gln
>WENV170487561
CEVO01069482
381459
Alphaproteobacteria
CAC
Val
>WENV170487874
CEVO01101573
365250
Alphaproteobacteria
GCC
Gly
>WENV170487258
CEVO01039924
237493
Alphaproteobacteria
CCA
Trp
>WENV170488623
CEVO01245426
313418
Alphaproteobacteria
GGC
Ala
>WENV170488061
CEVO01117977
268154
Alphaproteobacteria
TGT
Thr
>WENV170487962
CEVO01110104
59361
Alphaproteobacteria
GAG
Leu
>WENV170487683
CEVO01080429
159305
Alphaproteobacteria
GTC
Asp
>WENV170487277
CEVO01041564
23468
Alphaproteobacteria
GCT
Ser
>WENV170486885
CEVO01005425
339724
Alphaproteobacteria
TTG
Gln
>WENV170487776
CEVO01091353
339724
Alphaproteobacteria
TTG
Gln
>WENV170488175
CEVO01124631
339724
Alphaproteobacteria
TTG
Gln
>WENV170487292
CEVO01042986
421153
Alphaproteobacteria
>WENV170487400
CEVO01053011
421153
Alphaproteobacteria
>WENV170488122
CEVO01122076
421153
Alphaproteobacteria
>WENV170487448
CEVO01058001
338282
Alphaproteobacteria
GTT
Asn
>WENV170487697
CEVO01082397
338282
Alphaproteobacteria
GTT
Asn
>WENV170488028
CEVO01115653
338282
Alphaproteobacteria
GTT
Asn
>WENV170487807
CEVO01095291
147083
Alphaproteobacteria
GGG
Pro
>WENV170487285
CEVO01042178
147577
Alphaproteobacteria
CCG
Arg
>WENV170486806
CEVO01000342
199865
Alphaproteobacteria
CAT
Met
>WENV170487973
CEVO01111319
95928
Alphaproteobacteria
TAG
Leu
>WENV170488166
CEVO01124258
162801
Alphaproteobacteria
GTG
His
>WENV170487738
CEVO01087356
338289
Alphaproteobacteria
GAC
Val
>WENV170487638
CEVO01076796
74116
Alphaproteobacteria
CAG
Leu
>WENV170487212
CEVO01035200
193197
Alphaproteobacteria
ACG
Arg
>WENV170487370
CEVO01049715
417107
Alphaproteobacteria
GCA
Cys
>WENV170488281
CEVO01155494
151733
Alphaproteobacteria
GGG
Pro
>WENV170488522
CEVO01227041
148158
Alphaproteobacteria
ACG
Arg
>WENV170487832
CEVO01097336
339725
Alphaproteobacteria
GAA
Phe
>WENV170487850
CEVO01099533
339725
Alphaproteobacteria
GAA
Phe
>WENV170486926
CEVO01008833
167926
Alphaproteobacteria
CAT
Met
>WENV170487953
CEVO01109544
167926
Alphaproteobacteria
CAT
Met
>WENV170488579
CEVO01238047
161002
Alphaproteobacteria
GTG
His
>WENV170488420
CEVO01205012
130084
Alphaproteobacteria
GGG
Pro
>WENV170487644
CEVO01077258
284043
Alphaproteobacteria
CGT
Thr
>WENV170487706
CEVO01083439
338760
Alphaproteobacteria
GAA
Phe
>WENV170487671
CEVO01079945
237196
Alphaproteobacteria
CGT
Thr
>WENV170488264
CEVO01148767
145689
Alphaproteobacteria
CCT
Arg
>WENV170487414
CEVO01054076
160158
Alphaproteobacteria
GAT
Ile
>WENV170487469
CEVO01061257
412281
Alphaproteobacteria
CTG
Gln
>WENV170486853
CEVO01003464
23384
Alphaproteobacteria
GGA
Ser
>WENV170487498
CEVO01063643
303842
Alphaproteobacteria
TAC
Val
>WENV170487617
CEVO01075235
369678
Alphaproteobacteria
GGT
Thr
>WENV170488164
CEVO01124231
338287
Alphaproteobacteria
GGT
Thr
>WENV170487639
CEVO01076873
254524
Alphaproteobacteria
TAC
Val
>WENV170488104
CEVO01120453
339606
Alphaproteobacteria
>WENV170487060
CEVO01021936
29831
Alphaproteobacteria
TGA
Ser
>WENV170487980
CEVO01112052
150356
Alphaproteobacteria
GTC
Asp
>WENV170487700
CEVO01082894
23743
Alphaproteobacteria
GCT
Ser
>WENV170488120
CEVO01122008
114040
Alphaproteobacteria
CAA
Leu
>WENV170487148
CEVO01030115
377327
Alphaproteobacteria
GCC
Gly
>WENV170487383
CEVO01051059
377327
Alphaproteobacteria
GCC
Gly
>WENV170487853
CEVO01099677
23572
Alphaproteobacteria
TGA
Ser
>WENV170487949
CEVO01108986
191695
Alphaproteobacteria
CCT
Arg
>WENV170487828
CEVO01096895
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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