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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170487787
CEVO01092547
338634
Gammaproteobacteria
GCC
Gly
>WENV170487007
CEVO01016285
98124
Gammaproteobacteria
GAG
Leu
>WENV170487687
CEVO01080640
183605
Gammaproteobacteria
CCG
Arg
>WENV170486914
CEVO01007422
312287
Gammaproteobacteria
TGT
Thr
>WENV170488172
CEVO01124481
152460
Gammaproteobacteria
GGG
Pro
>WENV170488475
CEVO01217111
236030
Gammaproteobacteria
CCA
Trp
>WENV170487115
CEVO01026384
279385
Gammaproteobacteria
TTT
Lys
>WENV170486866
CEVO01004342
95717
Gammaproteobacteria
TAG
Leu
>WENV170486850
CEVO01003336
145489
Gammaproteobacteria
GAT
Ile
>WENV170487238
CEVO01038017
281920
Gammaproteobacteria
CCA
Trp
>WENV170486952
CEVO01011879
283668
Gammaproteobacteria
TTT
Lys
>WENV170487554
CEVO01068726
236013
Gammaproteobacteria
TGC
Ala
>WENV170488406
CEVO01200363
47425
Gammaproteobacteria
GGA
Ser
>WENV170487189
CEVO01033100
236025
Gammaproteobacteria
TTG
Gln
>WENV170487663
CEVO01079426
412799
Gammaproteobacteria
GCA
Cys
>WENV170486972
CEVO01013802
202944
Gammaproteobacteria
TGG
Pro
>WENV170487839
CEVO01098573
95750
Gammaproteobacteria
TAG
Leu
>WENV170488449
CEVO01211579
411767
Gammaproteobacteria
TCC
Gly
>WENV170488263
CEVO01148765
145490
Gammaproteobacteria
CAT
Met
>WENV170487226
CEVO01037034
237412
Gammaproteobacteria
TAC
Val
>WENV170487032
CEVO01018077
147118
Gammaproteobacteria
GAC
Val
>WENV170488450
CEVO01211579
377665
Gammaproteobacteria
GGT
Thr
>WENV170487590
CEVO01072523
145713
Gammaproteobacteria
CAT
Met
>WENV170488447
CEVO01211579
236033
Gammaproteobacteria
TGT
Thr
>WENV170487544
CEVO01068177
59415
Gammaproteobacteria
TAA
Leu
>WENV170488035
CEVO01116303
236034
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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