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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170499301
CEVT01141500
387387
Cyanobacteriota
GAC
Val
>WENV170498161
CEVT01011083
373624
Cyanobacteriota
TTG
Gln
>WENV170499547
CEVT01171970
373624
Cyanobacteriota
TTG
Gln
>WENV170498390
CEVT01032277
237009
Cyanobacteriota
GGC
Ala
>WENV170498654
CEVT01057740
145761
Cyanobacteriota
GTC
Asp
>WENV170499597
CEVT01177913
306125
Cyanobacteriota
GTG
His
>WENV170498462
CEVT01039104
23971
Cyanobacteriota
TGA
Ser
>WENV170499501
CEVT01165981
145098
Cyanobacteriota
GGG
Pro
>WENV170499306
CEVT01142611
339688
Cyanobacteriota
GAC
Val
>WENV170498941
CEVT01092821
162346
Cyanobacteriota
GGG
Pro
>WENV170498202
CEVT01014352
11030
Cyanobacteriota
GCT
Ser
>WENV170498894
CEVT01085924
153480
Cyanobacteriota
CAT
Met
>WENV170499396
CEVT01155462
37223
Cyanobacteriota
TAA
Leu
>WENV170499048
CEVT01107354
147238
Cyanobacteriota
CCG
Arg
>WENV170498984
CEVT01100148
68425
Cyanobacteriota
CAG
Leu
>WENV170499500
CEVT01165961
145893
Cyanobacteriota
CAT
Met
>WENV170498125
CEVT01006442
275071
Cyanobacteriota
CCA
Trp
>WENV170498459
CEVT01038969
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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