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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170500601
CEVU01028010
312287
Gammaproteobacteria
TGT
Thr
>WENV170500393
CEVU01010562
145489
Gammaproteobacteria
GAT
Ile
>WENV170500554
CEVU01022978
61925
Gammaproteobacteria
TAA
Leu
>WENV170501669
CEVU01147606
269248
Gammaproteobacteria
CCA
Trp
>WENV170502450
CEVU01366841
146791
Gammaproteobacteria
GAC
Val
>WENV170501753
CEVU01157793
322642
Gammaproteobacteria
GGT
Thr
>WENV170501738
CEVU01156031
247974
Gammaproteobacteria
CCA
Trp
>WENV170500394
CEVU01010562
236029
Gammaproteobacteria
TGC
Ala
>WENV170500612
CEVU01029780
173040
Gammaproteobacteria
GAC
Val
>WENV170502274
CEVU01312340
341782
Gammaproteobacteria
TTG
Gln
>WENV170500807
CEVU01049009
411842
Gammaproteobacteria
GCA
Cys
>WENV170501500
CEVU01125644
250885
Gammaproteobacteria
TGC
Ala
>WENV170500695
CEVU01038781
195303
Gammaproteobacteria
GAT
Ile
>WENV170500816
CEVU01049807
128930
Gammaproteobacteria
GTC
Asp
>WENV170500854
CEVU01053718
237421
Gammaproteobacteria
TGT
Thr
>WENV170501233
CEVU01092696
179790
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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