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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170502499
CEVV01000026
365250
Alphaproteobacteria
GCC
Gly
>WENV170503328
CEVV01078334
365250
Alphaproteobacteria
GCC
Gly
>WENV170502500
CEVV01000026
306070
Alphaproteobacteria
CCA
Trp
>WENV170503683
CEVV01119788
306070
Alphaproteobacteria
CCA
Trp
>WENV170503092
CEVV01051786
147089
Alphaproteobacteria
ACG
Arg
>WENV170503450
CEVV01092638
176908
Alphaproteobacteria
GTC
Asp
>WENV170502718
CEVV01018387
147083
Alphaproteobacteria
GGG
Pro
>WENV170503997
CEVV01157099
252148
Alphaproteobacteria
TGT
Thr
>WENV170502981
CEVV01040886
147877
Alphaproteobacteria
GTG
His
>WENV170504626
CEVV01351252
147877
Alphaproteobacteria
GTG
His
>WENV170503617
CEVV01112442
266073
Alphaproteobacteria
TTT
Lys
>WENV170502823
CEVV01026161
369678
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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