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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170512191
CEVZ01164563
313881
Gammaproteobacteria
GGC
Ala
>WENV170511764
CEVZ01117447
149035
Gammaproteobacteria
CCG
Arg
>WENV170511546
CEVZ01094073
61925
Gammaproteobacteria
TAA
Leu
>WENV170511611
CEVZ01100720
171935
Gammaproteobacteria
ACG
Arg
>WENV170513209
CEVZ01380381
171935
Gammaproteobacteria
ACG
Arg
>WENV170512986
CEVZ01261819
145196
Gammaproteobacteria
CAT
Met
>WENV170510718
CEVZ01023774
185163
Gammaproteobacteria
ACG
Arg
>WENV170512454
CEVZ01196944
149036
Gammaproteobacteria
CCA
Trp
>WENV170512718
CEVZ01225592
146791
Gammaproteobacteria
GAC
Val
>WENV170512393
CEVZ01189695
322642
Gammaproteobacteria
GGT
Thr
>WENV170511271
CEVZ01067390
145261
Gammaproteobacteria
CAT
Met
>WENV170512182
CEVZ01164051
340801
Gammaproteobacteria
CCT
Arg
>WENV170512248
CEVZ01172679
412476
Gammaproteobacteria
TCC
Gly
>WENV170510503
CEVZ01006521
319098
Gammaproteobacteria
TAC
Val
>WENV170510999
CEVZ01046580
195303
Gammaproteobacteria
GAT
Ile
>WENV170512170
CEVZ01162092
59658
Gammaproteobacteria
CAA
Leu
>WENV170510774
CEVZ01028172
203054
Gammaproteobacteria
ACG
Arg
>WENV170512960
CEVZ01246345
149037
Gammaproteobacteria
GAC
Val
>WENV170513346
CEVZ01427752
45411
Gammaproteobacteria
GGA
Ser
>WENV170512894
CEVZ01242137
198797
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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