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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170515270
CEWB01013434
267922
Alphaproteobacteria
CCA
Trp
>WENV170515855
CEWB01058296
339454
Alphaproteobacteria
>WENV170515852
CEWB01057910
167926
Alphaproteobacteria
CAT
Met
>WENV170515622
CEWB01039175
161002
Alphaproteobacteria
GTG
His
>WENV170516051
CEWB01077683
359842
Alphaproteobacteria
GAC
Val
>WENV170516149
CEWB01086861
348781
Alphaproteobacteria
GAA
Phe
>WENV170515893
CEWB01061603
163860
Alphaproteobacteria
GGG
Pro
>WENV170516531
CEWB01151470
412477
Alphaproteobacteria
GCA
Cys
>WENV170515075
CEWB01002008
258529
Alphaproteobacteria
TGC
Ala
>WENV170516033
CEWB01075300
160158
Alphaproteobacteria
GAT
Ile
>WENV170515703
CEWB01046393
412424
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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