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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170523259
CEWG01188397
237967
Gammaproteobacteria
TTT
Lys
>WENV170522474
CEWG01101653
290337
Gammaproteobacteria
TAC
Val
>WENV170521885
CEWG01045241
61925
Gammaproteobacteria
TAA
Leu
>WENV170522574
CEWG01111178
61925
Gammaproteobacteria
TAA
Leu
>WENV170522067
CEWG01063321
46594
Gammaproteobacteria
GGA
Ser
>WENV170523374
CEWG01200682
147647
Gammaproteobacteria
CAT
Met
>WENV170521327
CEWG01000122
154268
Gammaproteobacteria
ACG
Arg
>WENV170521328
CEWG01000461
322642
Gammaproteobacteria
GGT
Thr
>WENV170523242
CEWG01185550
322642
Gammaproteobacteria
GGT
Thr
>WENV170522124
CEWG01070024
69672
Gammaproteobacteria
TAA
Leu
>WENV170523131
CEWG01172113
270709
Gammaproteobacteria
GTG
His
>WENV170523153
CEWG01175841
411766
Gammaproteobacteria
GCA
Cys
>WENV170521945
CEWG01049932
173040
Gammaproteobacteria
GAC
Val
>WENV170523015
CEWG01157279
198797
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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